Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 BX295541.1-201ENST00000417774 250 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 RPS20P5-201ENST00000434808 360 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 RPS12P18-201ENST00000442381 270 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 MTND1P29-201ENST00000448112 647 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 AC004924.1-201ENST00000480160 781 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 RPL36AP51-201ENST00000487216 318 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 AC108078.2-201ENST00000510750 236 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 MTCO3P28-201ENST00000513351 515 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 SCARNA24.1-201ENST00000516465 137 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 AC090572.1-201ENST00000519251 160 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 ADI1P3-201ENST00000549509 470 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 H3F3AP1-201ENST00000559984 334 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 AL391840.1-201ENST00000571144 367 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 AC098848.2-201ENST00000588023 330 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 RPL23AP78-201ENST00000599928 470 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 AC073648.5-201ENST00000603502 305 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 AC084035.1-201ENST00000634543 607 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 AC110079.1-202ENST00000635213 138 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 Y_RNA.51-201ENST00000362725 102 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 RNU6-179P-201ENST00000363350 107 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 SNORA71.1-201ENST00000364523 117 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 SNORA44-201ENST00000384584 132 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 BMS1P22-201ENST00000414726 313 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AC093151.1-201ENST00000427711 313 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 UQCRHP3-201ENST00000451503 251 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 MTATP6P7-201ENST00000453315 681 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 MTCO2P18-201ENST00000457151 658 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AC126389.1-201ENST00000477436 290 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AC116562.3-201ENST00000506136 177 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AC079140.3-201ENST00000511111 550 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AC010493.1-201ENST00000513479 292 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 RNU1-103P-201ENST00000516502 125 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 RNU6-914P-201ENST00000516749 109 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 RNU6-430P-201ENST00000517078 107 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AC068587.5-201ENST00000528506 175 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AP002963.1-201ENST00000530590 184 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AP005136.1-201ENST00000579765 429 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 MIR3611-201ENST00000584484 83 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 HMGN2P15-201ENST00000585707 270 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 MTND4LP5-201ENST00000605152 292 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AC130324.3-201ENST00000614165 542 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 Z99571.1-201ENST00000636677 394 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 U2.21-201ENST00000637295 81 ntBASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX30Q5VWJ9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 MIR22-201ENST00000362190 85 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 ATG3P1-201ENST00000419507 911 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 RPL35AP12-201ENST00000425362 338 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 MTND4P32-201ENST00000437189 1237 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 DPPA3P1-201ENST00000448050 469 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 NANOGNBP1-201ENST00000448444 480 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 RAC1P5-201ENST00000512182 576 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AC022447.1-201ENST00000515358 464 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 Y_RNA.689-201ENST00000516589 107 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 RNU6-1315P-201ENST00000517187 99 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AP003122.3-201ENST00000526316 255 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AC084851.1-201ENST00000529105 249 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AC024909.2-201ENST00000553035 286 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AC025281.1-201ENST00000567026 265 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AC010653.1-201ENST00000571108 881 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AC080013.6-201ENST00000606185 215 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AL591516.1-201ENST00000611326 274 ntBASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SNX30Q5VWJ9 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNX30Q5VWJ9 MTND5P17-201ENST00000418405 1603 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms