Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.52□□□□□ -2.33
RIF1Q5UIP0 AL159152.1-201ENST00000635019 2587 ntBASIC0.51□□□□□ -2.33
RIF1Q5UIP0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
RIF1Q5UIP0 Y_RNA.185-201ENST00000363894 100 ntBASIC0.51□□□□□ -2.33
RIF1Q5UIP0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
RIF1Q5UIP0 RNA5SP252-201ENST00000391131 119 ntBASIC0.51□□□□□ -2.33
RIF1Q5UIP0 ARL2BPP3-201ENST00000421226 480 ntBASIC0.51□□□□□ -2.33
RIF1Q5UIP0 MTND5P14-201ENST00000441481 1267 ntBASIC0.51□□□□□ -2.33
RIF1Q5UIP0 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.51□□□□□ -2.33
RIF1Q5UIP0 AC104692.1-201ENST00000472406 90 ntBASIC0.51□□□□□ -2.33
RIF1Q5UIP0 RNA5SP468-201ENST00000516782 93 ntBASIC0.51□□□□□ -2.33
RIF1Q5UIP0 AC104997.1-201ENST00000519761 717 ntBASIC0.51□□□□□ -2.33
RIF1Q5UIP0 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.51□□□□□ -2.33
RIF1Q5UIP0 AC008751.2-201ENST00000597885 980 ntBASIC0.51□□□□□ -2.33
RIF1Q5UIP0 AC068620.3-201ENST00000602749 560 ntBASIC0.51□□□□□ -2.33
RIF1Q5UIP0 Y_RNA.804-201ENST00000615262 101 ntBASIC0.51□□□□□ -2.33
RIF1Q5UIP0 AC097372.5-201ENST00000623665 376 ntBASIC0.51□□□□□ -2.33
RIF1Q5UIP0 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.51□□□□□ -2.33
RIF1Q5UIP0 ZNF702P-202ENST00000434269 1966 ntBASIC0.51□□□□□ -2.33
RIF1Q5UIP0 RNU6-923P-201ENST00000364753 107 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 SNORA22-201ENST00000383907 134 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 SNORA22C-201ENST00000384614 134 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 COL6A4P2-205ENST00000509855 506 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 ERHP1-201ENST00000523006 310 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 VN1R81P-201ENST00000602085 372 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 RPL21P136-201ENST00000605378 396 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
RIF1Q5UIP0 AC008555.8-201ENST00000623602 2168 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
RIF1Q5UIP0 RNU6-1072P-201ENST00000384703 107 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 RNU6-19P-201ENST00000384718 107 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 RNU6-443P-201ENST00000384780 107 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.5□□□□□ -2.33
RIF1Q5UIP0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
RIF1Q5UIP0 NDUFB4P2-201ENST00000509515 391 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 AC025857.1-201ENST00000525252 377 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 MTCYBP23-201ENST00000558717 1102 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 SNORD39.2-201ENST00000579995 76 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 MIR3117-201ENST00000584034 78 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 AC012254.4-201ENST00000588843 273 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 AL096840.1-201ENST00000603287 93 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 SDR42E1P2-201ENST00000614861 481 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 SDR42E1P4-201ENST00000620894 481 ntBASIC0.5□□□□□ -2.33
RIF1Q5UIP0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.5□□□□□ -2.33
RIF1Q5UIP0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.5□□□□□ -2.33
RIF1Q5UIP0 SNORA8.3-201ENST00000384679 139 ntBASIC0.49□□□□□ -2.33
RIF1Q5UIP0 RNU6-700P-201ENST00000391043 107 ntBASIC0.49□□□□□ -2.33
RIF1Q5UIP0 HMGB1P17-201ENST00000403495 628 ntBASIC0.49□□□□□ -2.33
RIF1Q5UIP0 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.49□□□□□ -2.33
RIF1Q5UIP0 MTND5P15-201ENST00000434246 349 ntBASIC0.49□□□□□ -2.33
RIF1Q5UIP0 HMGB1P38-201ENST00000490557 577 ntBASIC0.49□□□□□ -2.33
RIF1Q5UIP0 SNORA62.5-201ENST00000516634 120 ntBASIC0.49□□□□□ -2.33
RIF1Q5UIP0 AC022690.1-201ENST00000526681 550 ntBASIC0.49□□□□□ -2.33
RIF1Q5UIP0 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.49□□□□□ -2.33
RIF1Q5UIP0 AC093788.1-201ENST00000609356 927 ntBASIC0.49□□□□□ -2.33
RIF1Q5UIP0 Y_RNA.65-201ENST00000362846 100 ntBASIC0.49□□□□□ -2.33
RIF1Q5UIP0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.49□□□□□ -2.33
RIF1Q5UIP0 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.49□□□□□ -2.33
RIF1Q5UIP0 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.49□□□□□ -2.33
RIF1Q5UIP0 OR5AL2P-201ENST00000532185 920 ntBASIC0.49□□□□□ -2.33
RIF1Q5UIP0 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.49□□□□□ -2.33
RIF1Q5UIP0 AP000811.1-201ENST00000603803 651 ntBASIC0.49□□□□□ -2.33
RIF1Q5UIP0 DUXAP10-204ENST00000612052 616 ntBASIC0.49□□□□□ -2.33
RIF1Q5UIP0 SDAD1P2-201ENST00000441308 2028 ntBASIC0.49□□□□□ -2.33
RIF1Q5UIP0 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.49□□□□□ -2.33
RIF1Q5UIP0 RNA5SP205-201ENST00000364653 136 ntBASIC0.48□□□□□ -2.33
RIF1Q5UIP0 Y_RNA.375-201ENST00000365625 101 ntBASIC0.48□□□□□ -2.33
RIF1Q5UIP0 RNU6-225P-201ENST00000384613 103 ntBASIC0.48□□□□□ -2.33
RIF1Q5UIP0 Y_RNA.552-201ENST00000384665 112 ntBASIC0.48□□□□□ -2.33
RIF1Q5UIP0 MIR153-2-201ENST00000385225 87 ntBASIC0.48□□□□□ -2.33
RIF1Q5UIP0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.48□□□□□ -2.33
RIF1Q5UIP0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.48□□□□□ -2.33
RIF1Q5UIP0 RPS24P6-201ENST00000452670 400 ntBASIC0.48□□□□□ -2.33
RIF1Q5UIP0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.48□□□□□ -2.33
RIF1Q5UIP0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.48□□□□□ -2.33
RIF1Q5UIP0 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.48□□□□□ -2.33
RIF1Q5UIP0 SNORD26-201ENST00000384147 75 ntBASIC0.48□□□□□ -2.33
RIF1Q5UIP0 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.48□□□□□ -2.33
RIF1Q5UIP0 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.48□□□□□ -2.33
RIF1Q5UIP0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.48□□□□□ -2.33
RIF1Q5UIP0 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.48□□□□□ -2.33
RIF1Q5UIP0 RNU6-322P-201ENST00000516010 103 ntBASIC0.48□□□□□ -2.33
RIF1Q5UIP0 RNU4-77P-201ENST00000516692 156 ntBASIC0.48□□□□□ -2.33
RIF1Q5UIP0 RNU2-19P-201ENST00000517288 84 ntBASIC0.48□□□□□ -2.33
RIF1Q5UIP0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.48□□□□□ -2.33
RIF1Q5UIP0 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.48□□□□□ -2.33
RIF1Q5UIP0 AC106028.5-201ENST00000610332 395 ntBASIC0.48□□□□□ -2.33
RIF1Q5UIP0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.48□□□□□ -2.33
RIF1Q5UIP0 AL138880.2-201ENST00000616214 239 ntBASIC0.48□□□□□ -2.33
RIF1Q5UIP0 AC006001.4-201ENST00000622243 395 ntBASIC0.48□□□□□ -2.33
RIF1Q5UIP0 SNORD95.1-201ENST00000364099 68 ntBASIC0.47□□□□□ -2.33
RIF1Q5UIP0 RPS4XP3-201ENST00000398541 413 ntBASIC0.47□□□□□ -2.33
RIF1Q5UIP0 AL158823.1-201ENST00000418441 478 ntBASIC0.47□□□□□ -2.33
RIF1Q5UIP0 SNRPEP4-201ENST00000435815 279 ntBASIC0.47□□□□□ -2.33
RIF1Q5UIP0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.47□□□□□ -2.33
RIF1Q5UIP0 AC027575.1-201ENST00000481064 460 ntBASIC0.47□□□□□ -2.33
RIF1Q5UIP0 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.47□□□□□ -2.33
RIF1Q5UIP0 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.47□□□□□ -2.33
RIF1Q5UIP0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.47□□□□□ -2.33
RIF1Q5UIP0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms