Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 MIR1182-201ENST00000408363 97 ntBASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 snoU13.20-201ENST00000459180 104 ntBASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 Y_RNA.637-201ENST00000459424 114 ntBASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 Y_RNA.677-201ENST00000516401 85 ntBASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 FTH1P11-201ENST00000517577 551 ntBASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 AP003327.1-201ENST00000529684 127 ntBASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 AC109810.1-201ENST00000534066 224 ntBASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 NACAP3-201ENST00000552100 481 ntBASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 MIR4716-201ENST00000579628 84 ntBASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 MIR5695-201ENST00000579717 85 ntBASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 MIR3145-201ENST00000580727 82 ntBASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 AL162431.4-201ENST00000604674 411 ntBASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 MIR6748-201ENST00000610433 71 ntBASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 AC048347.1-201ENST00000624621 427 ntBASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 AC009541.1-201ENST00000438279 2662 ntBASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RNFT1Q5M7Z0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AC018529.3-201ENST00000624212 2254 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 RNU5A-1-201ENST00000362698 116 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 SNORA25.7-201ENST00000364375 127 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 RNA5SP90-201ENST00000364801 99 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 RNU6-541P-201ENST00000384709 110 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 SNORA26.2-201ENST00000390922 122 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 RNY4P29-201ENST00000410801 97 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 HMGN2P27-201ENST00000427352 270 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 MRPL48P1-201ENST00000445390 636 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AC097484.1-201ENST00000471148 389 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 GMPSP1-201ENST00000514075 579 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 RNU6-1095P-201ENST00000516148 108 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AC108738.1-201ENST00000603703 237 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AC087783.2-201ENST00000605070 562 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 FAM25E-202ENST00000608562 189 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AL139124.1-201ENST00000609123 421 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AC138965.3-201ENST00000623875 498 ntBASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.73□□□□□ -1.65
RNFT1Q5M7Z0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 AF127577.6-201ENST00000623352 2191 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 RN7SKP103-201ENST00000363848 320 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 RNA5SP223-201ENST00000365174 120 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 SNORA5.1-201ENST00000384275 131 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 RNU6-159P-201ENST00000391080 106 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 AL035079.1-201ENST00000405210 287 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 EIF1AXP1-201ENST00000419267 435 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 AL772161.1-201ENST00000439130 476 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 RPL7AP61-201ENST00000443410 636 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 IGLV2-34-201ENST00000490007 283 ntBASIC4.72□□□□□ -1.65
RNFT1Q5M7Z0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms