Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
HMGN3Q15651 SNORA70.7-201ENST00000384159 133 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 RNU4-31P-201ENST00000384211 141 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
HMGN3Q15651 RNU6-750P-201ENST00000390946 107 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.68□□□□□ -2.3
HMGN3Q15651 CR848007.2-201ENST00000424918 787 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.68□□□□□ -2.3
HMGN3Q15651 AL035410.1-201ENST00000427409 427 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 AC004865.1-201ENST00000442276 1003 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 AC244505.5-201ENST00000443639 207 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 RAC1P7-201ENST00000445367 377 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 BMI1P1-201ENST00000445879 941 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 AL592447.1-201ENST00000447592 540 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.68□□□□□ -2.3
HMGN3Q15651 RPL9P9-202ENST00000466501 579 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.68□□□□□ -2.3
HMGN3Q15651 RNU6-1095P-201ENST00000516148 108 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 SNORA31.16-201ENST00000516773 139 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 AP002748.2-201ENST00000528671 348 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 CBX3P8-201ENST00000532412 525 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 AL356432.3-201ENST00000568952 465 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.68□□□□□ -2.3
HMGN3Q15651 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.68□□□□□ -2.3
HMGN3Q15651 AC008121.3-201ENST00000618726 433 ntBASIC0.68□□□□□ -2.3
HMGN3Q15651 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
HMGN3Q15651 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
HMGN3Q15651 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
HMGN3Q15651 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.67□□□□□ -2.3
HMGN3Q15651 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.67□□□□□ -2.3
HMGN3Q15651 NDUFS5P1-201ENST00000405668 289 ntBASIC0.67□□□□□ -2.3
HMGN3Q15651 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.67□□□□□ -2.3
HMGN3Q15651 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC0.67□□□□□ -2.3
HMGN3Q15651 RPL7P29-201ENST00000437151 728 ntBASIC0.67□□□□□ -2.3
HMGN3Q15651 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.67□□□□□ -2.3
HMGN3Q15651 RPS4XP11-201ENST00000446897 772 ntBASIC0.67□□□□□ -2.3
HMGN3Q15651 AC138853.1-201ENST00000503549 823 ntBASIC0.67□□□□□ -2.3
HMGN3Q15651 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC0.67□□□□□ -2.3
HMGN3Q15651 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.67□□□□□ -2.3
HMGN3Q15651 MTND4LP5-201ENST00000605152 292 ntBASIC0.67□□□□□ -2.3
HMGN3Q15651 AC008945.2-201ENST00000606056 604 ntBASIC0.67□□□□□ -2.3
HMGN3Q15651 AL589994.2-201ENST00000621124 579 ntBASIC0.67□□□□□ -2.3
HMGN3Q15651 AL118508.4-201ENST00000624142 1176 ntBASIC0.67□□□□□ -2.3
HMGN3Q15651 AL136313.1-201ENST00000624804 202 ntBASIC0.67□□□□□ -2.3
HMGN3Q15651 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.67□□□□□ -2.3
HMGN3Q15651 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
HMGN3Q15651 AL049641.1-201ENST00000441055 1948 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 AC008163.1-202ENST00000636004 2889 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 DEFB108F-201ENST00000344638 222 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 RNU11-5P-201ENST00000391216 129 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 RPS15AP12-201ENST00000419498 388 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 EIF4EP2-201ENST00000422816 654 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.66□□□□□ -2.3
HMGN3Q15651 MTND2P29-201ENST00000438595 412 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.66□□□□□ -2.3
HMGN3Q15651 AL133373.1-201ENST00000497098 94 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 RNU6-202P-201ENST00000515998 96 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.66□□□□□ -2.3
HMGN3Q15651 DEFB108D-201ENST00000527787 222 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 MIR3921-201ENST00000577308 85 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 MIR4698-201ENST00000577795 80 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 AP005136.1-201ENST00000579765 429 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 MIR4769-201ENST00000584126 77 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 MIR4298-201ENST00000584380 73 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 VN1R107P-201ENST00000601784 209 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 AP000403.1-201ENST00000603349 851 ntBASIC0.66□□□□□ -2.3
HMGN3Q15651 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.65□□□□□ -2.31
HMGN3Q15651 RNU6-730P-201ENST00000383954 104 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 MIR518D-201ENST00000385014 87 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 U6atac.2-201ENST00000408644 118 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 RNU2-63P-201ENST00000410792 194 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 CYCSP33-201ENST00000414485 327 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.65□□□□□ -2.31
HMGN3Q15651 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.65□□□□□ -2.31
HMGN3Q15651 AL354941.1-201ENST00000438600 464 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 AL049734.2-201ENST00000441066 616 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.65□□□□□ -2.31
HMGN3Q15651 MRPL35P4-201ENST00000453682 566 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 RPS20P24-201ENST00000457473 361 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 UBL5P1-201ENST00000507979 193 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
HMGN3Q15651 RNU7-40P-201ENST00000516397 64 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 RNU6-1282P-201ENST00000516735 96 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.65□□□□□ -2.31
HMGN3Q15651 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.65□□□□□ -2.31
HMGN3Q15651 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.65□□□□□ -2.31
HMGN3Q15651 AP000907.2-201ENST00000530827 353 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.65□□□□□ -2.31
HMGN3Q15651 AC090115.3-201ENST00000553218 849 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 MTCYBP22-201ENST00000603788 447 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 AL355802.3-201ENST00000607571 545 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 AC097468.3-201ENST00000607956 456 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 AC009974.1-201ENST00000608881 455 ntBASIC0.65□□□□□ -2.31
HMGN3Q15651 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
HMGN3Q15651 AC106800.4-201ENST00000614905 153 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms