Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 AC128657.1-201ENST00000549459 145 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.01□□□□□ -1.77
SF3B3Q15393 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.01□□□□□ -1.77
SF3B3Q15393 AL355375.2-201ENST00000574825 175 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 MIR4775-201ENST00000581168 75 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 AC243960.4-201ENST00000600532 288 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 AC078795.3-201ENST00000602913 472 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 RNU6-89P-201ENST00000606519 100 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.01□□□□□ -1.77
SF3B3Q15393 AC006329.2-201ENST00000611491 394 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 U7.8-201ENST00000619968 63 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SF3B3Q15393 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SF3B3Q15393 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SF3B3Q15393 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4□□□□□ -1.77
SF3B3Q15393 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SF3B3Q15393 RNU6-989P-201ENST00000362756 107 ntBASIC4□□□□□ -1.77
SF3B3Q15393 Y_RNA.58-201ENST00000362807 102 ntBASIC4□□□□□ -1.77
SF3B3Q15393 Y_RNA.154-201ENST00000363624 102 ntBASIC4□□□□□ -1.77
SF3B3Q15393 Y_RNA.231-201ENST00000364358 102 ntBASIC4□□□□□ -1.77
SF3B3Q15393 RNU6-1078P-201ENST00000364522 103 ntBASIC4□□□□□ -1.77
SF3B3Q15393 RNY3P1-201ENST00000365085 102 ntBASIC4□□□□□ -1.77
SF3B3Q15393 RNY3-201ENST00000365484 102 ntBASIC4□□□□□ -1.77
SF3B3Q15393 Y_RNA.490-201ENST00000384413 102 ntBASIC4□□□□□ -1.77
SF3B3Q15393 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4□□□□□ -1.77
SF3B3Q15393 AL138885.1-201ENST00000405921 675 ntBASIC4□□□□□ -1.77
SF3B3Q15393 AL354751.2-201ENST00000415471 210 ntBASIC4□□□□□ -1.77
SF3B3Q15393 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4□□□□□ -1.77
SF3B3Q15393 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4□□□□□ -1.77
SF3B3Q15393 SETP5-201ENST00000437270 562 ntBASIC4□□□□□ -1.77
SF3B3Q15393 AC233279.1-201ENST00000455300 423 ntBASIC4□□□□□ -1.77
SF3B3Q15393 HMGN2P16-201ENST00000456802 261 ntBASIC4□□□□□ -1.77
SF3B3Q15393 AL136097.1-201ENST00000456945 913 ntBASIC4□□□□□ -1.77
SF3B3Q15393 RNU7-182P-201ENST00000459009 62 ntBASIC4□□□□□ -1.77
SF3B3Q15393 MRPS17P3-201ENST00000465453 385 ntBASIC4□□□□□ -1.77
SF3B3Q15393 HMGB1P25-201ENST00000468402 607 ntBASIC4□□□□□ -1.77
SF3B3Q15393 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4□□□□□ -1.77
SF3B3Q15393 AL049830.2-201ENST00000480072 201 ntBASIC4□□□□□ -1.77
SF3B3Q15393 SNORA19.2-201ENST00000516013 114 ntBASIC4□□□□□ -1.77
SF3B3Q15393 RNU7-51P-201ENST00000516560 62 ntBASIC4□□□□□ -1.77
SF3B3Q15393 AC107934.2-201ENST00000518653 310 ntBASIC4□□□□□ -1.77
SF3B3Q15393 HMGB1P41-201ENST00000520234 440 ntBASIC4□□□□□ -1.77
SF3B3Q15393 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4□□□□□ -1.77
SF3B3Q15393 PSMA3P-201ENST00000555485 635 ntBASIC4□□□□□ -1.77
SF3B3Q15393 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4□□□□□ -1.77
SF3B3Q15393 AC005498.1-201ENST00000592125 465 ntBASIC4□□□□□ -1.77
SF3B3Q15393 AL355812.1-201ENST00000603215 216 ntBASIC4□□□□□ -1.77
SF3B3Q15393 AC126177.8-201ENST00000618339 1015 ntBASIC4□□□□□ -1.77
SF3B3Q15393 AL160413.1-201ENST00000622780 310 ntBASIC4□□□□□ -1.77
SF3B3Q15393 AL136313.1-201ENST00000624804 202 ntBASIC4□□□□□ -1.77
SF3B3Q15393 AL079305.1-201ENST00000623159 3008 ntBASIC4□□□□□ -1.77
SF3B3Q15393 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SF3B3Q15393 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SF3B3Q15393 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SF3B3Q15393 PABPC1P7-201ENST00000413177 1513 ntBASIC4□□□□□ -1.77
SF3B3Q15393 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
SF3B3Q15393 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
SF3B3Q15393 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SF3B3Q15393 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SF3B3Q15393 RNU6-1227P-201ENST00000383981 107 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 SNORA32.2-201ENST00000384049 122 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 Y_RNA.510-201ENST00000384511 114 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 MIR1250-201ENST00000408098 113 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 RNU2-39P-201ENST00000410604 198 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 Y_RNA.615-201ENST00000410769 117 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.99□□□□□ -1.77
SF3B3Q15393 AL356968.1-201ENST00000416622 474 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 ERLEC1P1-201ENST00000433806 578 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 VDAC1P3-201ENST00000434069 851 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.99□□□□□ -1.77
SF3B3Q15393 RPS29P15-201ENST00000458329 171 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 AC021205.2-201ENST00000480069 347 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SF3B3Q15393 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.99□□□□□ -1.77
SF3B3Q15393 AC097462.2-201ENST00000504623 481 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 AC116562.3-201ENST00000506136 177 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 AC092436.1-201ENST00000506450 503 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 AC008885.1-201ENST00000514930 301 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.99□□□□□ -1.77
SF3B3Q15393 AC068587.5-201ENST00000528506 175 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.99□□□□□ -1.77
SF3B3Q15393 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.99□□□□□ -1.77
SF3B3Q15393 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.99□□□□□ -1.77
SF3B3Q15393 AL442663.2-201ENST00000554385 511 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 SCOCP1-201ENST00000554676 349 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 MIR5047-201ENST00000579212 100 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 MIR4742-201ENST00000581069 85 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.99□□□□□ -1.77
SF3B3Q15393 AL033523.1-201ENST00000605153 153 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 AC093732.2-201ENST00000607950 274 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 AC006023.2-201ENST00000609916 167 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 AC093913.1-201ENST00000614178 329 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 RMST_7.1-201ENST00000621935 268 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 MIR1302-1-201ENST00000637932 143 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.99□□□□□ -1.77
SF3B3Q15393 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.99□□□□□ -1.77
SF3B3Q15393 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
SF3B3Q15393 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms