Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 MIR8081-201ENST00000611533 95 ntBASIC1.58□□□□□ -2.16
FOXF1Q12946 AC005332.10-201ENST00000612725 619 ntBASIC1.58□□□□□ -2.16
FOXF1Q12946 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
FOXF1Q12946 AP006437.1-201ENST00000641440 3685 ntBASIC1.58□□□□□ -2.16
FOXF1Q12946 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
FOXF1Q12946 AC002543.1-201ENST00000299783 1954 ntBASIC1.58□□□□□ -2.16
FOXF1Q12946 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
FOXF1Q12946 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.57□□□□□ -2.16
FOXF1Q12946 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
FOXF1Q12946 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.57□□□□□ -2.16
FOXF1Q12946 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
FOXF1Q12946 SNORA46.1-201ENST00000391069 153 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 MIR888-201ENST00000401186 77 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 SNORD23.1-201ENST00000408212 104 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.57□□□□□ -2.16
FOXF1Q12946 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.57□□□□□ -2.16
FOXF1Q12946 AC096649.2-201ENST00000416186 393 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 AL451054.2-201ENST00000420896 202 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.57□□□□□ -2.16
FOXF1Q12946 ZYG11AP1-201ENST00000430329 837 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 AL451074.3-201ENST00000437709 472 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.57□□□□□ -2.16
FOXF1Q12946 OSTCP8-201ENST00000445117 448 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 RPL21P134-201ENST00000453468 483 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 PPP1R2P5-201ENST00000457256 603 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 MTND1P16-201ENST00000465177 898 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 MRPS17P3-201ENST00000465453 385 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.57□□□□□ -2.16
FOXF1Q12946 AC022447.3-201ENST00000506865 495 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.57□□□□□ -2.16
FOXF1Q12946 SNORA19.3-201ENST00000516165 130 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.57□□□□□ -2.16
FOXF1Q12946 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.57□□□□□ -2.16
FOXF1Q12946 AC069431.2-201ENST00000604149 1099 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 AC239868.4-201ENST00000608318 671 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 FTX_3.1-201ENST00000610451 147 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 AC107075.1-201ENST00000613695 314 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.57□□□□□ -2.16
FOXF1Q12946 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.57□□□□□ -2.16
FOXF1Q12946 MTND4P27-201ENST00000450813 1354 ntBASIC1.57□□□□□ -2.16
FOXF1Q12946 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.57□□□□□ -2.16
FOXF1Q12946 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
FOXF1Q12946 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.56□□□□□ -2.16
FOXF1Q12946 RNU6-234P-201ENST00000365229 104 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 RNU6-744P-201ENST00000365557 107 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
FOXF1Q12946 RNU6-1083P-201ENST00000384022 107 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 RNU6-1316P-201ENST00000384242 108 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 MIR17-201ENST00000385012 84 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 AL356421.1-201ENST00000403255 413 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
FOXF1Q12946 RNU6-920P-201ENST00000410926 92 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 RNU6-516P-201ENST00000411381 104 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.56□□□□□ -2.16
FOXF1Q12946 RPS3AP37-201ENST00000419176 745 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 COX7BP2-201ENST00000437976 242 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.56□□□□□ -2.16
FOXF1Q12946 AC013267.1-201ENST00000458227 267 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 MEMO1P3-201ENST00000459811 302 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.56□□□□□ -2.16
FOXF1Q12946 AC021146.8-201ENST00000507455 733 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.56□□□□□ -2.16
FOXF1Q12946 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.56□□□□□ -2.16
FOXF1Q12946 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.56□□□□□ -2.16
FOXF1Q12946 AC110760.3-202ENST00000515177 371 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 RNU6-150P-201ENST00000516237 95 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.56□□□□□ -2.16
FOXF1Q12946 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.56□□□□□ -2.16
FOXF1Q12946 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.56□□□□□ -2.16
FOXF1Q12946 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.56□□□□□ -2.16
FOXF1Q12946 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
FOXF1Q12946 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.56□□□□□ -2.16
FOXF1Q12946 AL359212.1-201ENST00000556608 614 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.56□□□□□ -2.16
FOXF1Q12946 HMGN2P15-201ENST00000585707 270 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 AP001269.3-201ENST00000588718 329 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.56□□□□□ -2.16
FOXF1Q12946 TUG1_2.1-201ENST00000614234 87 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 AC091834.1-201ENST00000614543 472 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 AL138960.2-201ENST00000625145 535 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 AC019226.1-201ENST00000625666 515 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 AC241585.2-209ENST00000638217 143 ntBASIC1.56□□□□□ -2.16
FOXF1Q12946 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
FOXF1Q12946 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
FOXF1Q12946 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
FOXF1Q12946 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
FOXF1Q12946 RNU4-92P-201ENST00000363783 136 ntBASIC1.55□□□□□ -2.16
FOXF1Q12946 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
FOXF1Q12946 SNORA26.9-201ENST00000391322 122 ntBASIC1.55□□□□□ -2.16
FOXF1Q12946 AL627390.1-201ENST00000396055 340 ntBASIC1.55□□□□□ -2.16
FOXF1Q12946 RN7SKP266-201ENST00000410232 287 ntBASIC1.55□□□□□ -2.16
FOXF1Q12946 CYCSP49-201ENST00000420810 319 ntBASIC1.55□□□□□ -2.16
FOXF1Q12946 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.55□□□□□ -2.16
FOXF1Q12946 BX119904.4-201ENST00000424402 301 ntBASIC1.55□□□□□ -2.16
FOXF1Q12946 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.55□□□□□ -2.16
FOXF1Q12946 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.55□□□□□ -2.16
FOXF1Q12946 HMGB1P9-201ENST00000429856 646 ntBASIC1.55□□□□□ -2.16
FOXF1Q12946 USP12PX-201ENST00000432383 1057 ntBASIC1.55□□□□□ -2.16
FOXF1Q12946 MICF-203ENST00000432679 129 ntBASIC1.55□□□□□ -2.16
FOXF1Q12946 RPS15AP5-201ENST00000436276 388 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms