Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 AC004865.1-201ENST00000442276 1003 ntBASIC1.22□□□□□ -2.21
CPSF1Q10570 AC097499.1-201ENST00000444277 208 ntBASIC1.22□□□□□ -2.21
CPSF1Q10570 SUMO2P2-201ENST00000456482 255 ntBASIC1.22□□□□□ -2.21
CPSF1Q10570 snoU109.1-201ENST00000459339 135 ntBASIC1.22□□□□□ -2.21
CPSF1Q10570 AC114982.2-201ENST00000461396 358 ntBASIC1.22□□□□□ -2.21
CPSF1Q10570 RPL31P60-201ENST00000478450 367 ntBASIC1.22□□□□□ -2.21
CPSF1Q10570 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.22□□□□□ -2.21
CPSF1Q10570 AL121821.2-201ENST00000556081 394 ntBASIC1.22□□□□□ -2.21
CPSF1Q10570 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.22□□□□□ -2.21
CPSF1Q10570 AC012669.1-201ENST00000603209 283 ntBASIC1.22□□□□□ -2.21
CPSF1Q10570 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CPSF1Q10570 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CPSF1Q10570 RN7SKP158-201ENST00000410453 326 ntBASIC1.21□□□□□ -2.22
CPSF1Q10570 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.21□□□□□ -2.22
CPSF1Q10570 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.21□□□□□ -2.22
CPSF1Q10570 SNORA31.13-201ENST00000516624 135 ntBASIC1.21□□□□□ -2.22
CPSF1Q10570 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.21□□□□□ -2.22
CPSF1Q10570 AC012443.1-201ENST00000605605 231 ntBASIC1.21□□□□□ -2.22
CPSF1Q10570 AC073968.1-201ENST00000618594 637 ntBASIC1.21□□□□□ -2.22
CPSF1Q10570 RNA5SP276-201ENST00000362580 94 ntBASIC1.2□□□□□ -2.22
CPSF1Q10570 RNU6-1035P-201ENST00000384477 107 ntBASIC1.2□□□□□ -2.22
CPSF1Q10570 AL445305.1-201ENST00000432577 575 ntBASIC1.2□□□□□ -2.22
CPSF1Q10570 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.2□□□□□ -2.22
CPSF1Q10570 RNU6-1132P-201ENST00000459214 107 ntBASIC1.2□□□□□ -2.22
CPSF1Q10570 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.2□□□□□ -2.22
CPSF1Q10570 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CPSF1Q10570 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.2□□□□□ -2.22
CPSF1Q10570 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.2□□□□□ -2.22
CPSF1Q10570 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.2□□□□□ -2.22
CPSF1Q10570 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.2□□□□□ -2.22
CPSF1Q10570 AC010186.2-204ENST00000537668 439 ntBASIC1.2□□□□□ -2.22
CPSF1Q10570 AC023825.1-201ENST00000566704 1030 ntBASIC1.2□□□□□ -2.22
CPSF1Q10570 AC243960.4-201ENST00000600532 288 ntBASIC1.2□□□□□ -2.22
CPSF1Q10570 AL020996.3-201ENST00000606617 222 ntBASIC1.2□□□□□ -2.22
CPSF1Q10570 AP000254.1-201ENST00000609934 520 ntBASIC1.2□□□□□ -2.22
CPSF1Q10570 AC093838.1-201ENST00000613014 469 ntBASIC1.2□□□□□ -2.22
CPSF1Q10570 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CPSF1Q10570 AC073308.1-201ENST00000623696 305 ntBASIC1.2□□□□□ -2.22
CPSF1Q10570 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.2□□□□□ -2.22
CPSF1Q10570 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.2□□□□□ -2.22
CPSF1Q10570 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
CPSF1Q10570 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
CPSF1Q10570 RNU6-1105P-201ENST00000384774 107 ntBASIC1.19□□□□□ -2.22
CPSF1Q10570 Z86062.1-201ENST00000406773 777 ntBASIC1.19□□□□□ -2.22
CPSF1Q10570 AL109913.1-201ENST00000421173 514 ntBASIC1.19□□□□□ -2.22
CPSF1Q10570 AC096920.1-201ENST00000423991 241 ntBASIC1.19□□□□□ -2.22
CPSF1Q10570 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.19□□□□□ -2.22
CPSF1Q10570 AC093106.2-201ENST00000428212 385 ntBASIC1.19□□□□□ -2.22
CPSF1Q10570 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.19□□□□□ -2.22
CPSF1Q10570 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.19□□□□□ -2.22
CPSF1Q10570 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.19□□□□□ -2.22
CPSF1Q10570 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.19□□□□□ -2.22
CPSF1Q10570 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.19□□□□□ -2.22
CPSF1Q10570 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.19□□□□□ -2.22
CPSF1Q10570 AC110792.4-201ENST00000609843 298 ntBASIC1.19□□□□□ -2.22
CPSF1Q10570 DDX43P2-201ENST00000604753 1354 ntBASIC1.19□□□□□ -2.22
CPSF1Q10570 AC010889.1-201ENST00000566193 2666 ntBASIC1.18□□□□□ -2.22
CPSF1Q10570 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CPSF1Q10570 OR9R1P-201ENST00000412200 877 ntBASIC1.18□□□□□ -2.22
CPSF1Q10570 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.18□□□□□ -2.22
CPSF1Q10570 AC004941.2-201ENST00000427009 228 ntBASIC1.18□□□□□ -2.22
CPSF1Q10570 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.18□□□□□ -2.22
CPSF1Q10570 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.18□□□□□ -2.22
CPSF1Q10570 AL022238.1-201ENST00000442557 355 ntBASIC1.18□□□□□ -2.22
CPSF1Q10570 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.18□□□□□ -2.22
CPSF1Q10570 RNU5F-8P-201ENST00000515941 111 ntBASIC1.18□□□□□ -2.22
CPSF1Q10570 MTCYBP27-201ENST00000555160 670 ntBASIC1.18□□□□□ -2.22
CPSF1Q10570 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.18□□□□□ -2.22
CPSF1Q10570 AL773524.1-201ENST00000614065 229 ntBASIC1.18□□□□□ -2.22
CPSF1Q10570 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.18□□□□□ -2.22
CPSF1Q10570 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.18□□□□□ -2.22
CPSF1Q10570 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.18□□□□□ -2.22
CPSF1Q10570 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
CPSF1Q10570 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CPSF1Q10570 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CPSF1Q10570 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.17□□□□□ -2.22
CPSF1Q10570 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.17□□□□□ -2.22
CPSF1Q10570 C1DP3-201ENST00000455013 423 ntBASIC1.17□□□□□ -2.22
CPSF1Q10570 AC147055.4-201ENST00000504399 745 ntBASIC1.17□□□□□ -2.22
CPSF1Q10570 RNU6-798P-201ENST00000516912 103 ntBASIC1.17□□□□□ -2.22
CPSF1Q10570 DEFB108E-201ENST00000524692 240 ntBASIC1.17□□□□□ -2.22
CPSF1Q10570 AC018630.2-201ENST00000534866 2403 ntBASIC1.17□□□□□ -2.22
CPSF1Q10570 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
CPSF1Q10570 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
CPSF1Q10570 RNU6-730P-201ENST00000383954 104 ntBASIC1.16□□□□□ -2.22
CPSF1Q10570 ERHP2-201ENST00000402323 299 ntBASIC1.16□□□□□ -2.22
CPSF1Q10570 RPL30P13-201ENST00000418873 348 ntBASIC1.16□□□□□ -2.22
CPSF1Q10570 AC099548.1-201ENST00000421443 426 ntBASIC1.16□□□□□ -2.22
CPSF1Q10570 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.16□□□□□ -2.22
CPSF1Q10570 AC104164.3-201ENST00000467363 1258 ntBASIC1.16□□□□□ -2.22
CPSF1Q10570 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.16□□□□□ -2.22
CPSF1Q10570 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.16□□□□□ -2.22
CPSF1Q10570 AC008834.1-201ENST00000511612 175 ntBASIC1.16□□□□□ -2.22
CPSF1Q10570 AC117525.1-201ENST00000515228 503 ntBASIC1.16□□□□□ -2.22
CPSF1Q10570 AC022447.1-201ENST00000515358 464 ntBASIC1.16□□□□□ -2.22
CPSF1Q10570 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.16□□□□□ -2.22
CPSF1Q10570 RPL21P5-201ENST00000554662 472 ntBASIC1.16□□□□□ -2.22
CPSF1Q10570 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.16□□□□□ -2.22
CPSF1Q10570 AC055876.5-201ENST00000605667 259 ntBASIC1.16□□□□□ -2.22
CPSF1Q10570 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms