Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RNU1-72P-201ENST00000362976 153 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 RNU4-42P-201ENST00000364738 142 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 RNU6-1300P-201ENST00000391046 108 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 RNU6-932P-201ENST00000391108 106 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 NDUFS5P1-201ENST00000405668 289 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 VN1R36P-201ENST00000414936 291 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.45□□□□□ -2.18
H3F3AP84243 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.45□□□□□ -2.18
H3F3AP84243 AC092427.1-201ENST00000439177 601 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
H3F3AP84243 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.45□□□□□ -2.18
H3F3AP84243 SSXP1-201ENST00000453640 473 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 HMGN2P23-201ENST00000456759 269 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.45□□□□□ -2.18
H3F3AP84243 snoU13.23-201ENST00000458863 104 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 AC008481.1-201ENST00000463278 396 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.45□□□□□ -2.18
H3F3AP84243 TMEM251P1-201ENST00000503717 318 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.45□□□□□ -2.18
H3F3AP84243 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.45□□□□□ -2.18
H3F3AP84243 AC084851.1-201ENST00000529105 249 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 MTCO2P15-201ENST00000532655 656 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 AC006199.1-201ENST00000548728 219 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.45□□□□□ -2.18
H3F3AP84243 AC021739.1-201ENST00000559631 174 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
H3F3AP84243 MIR4637-201ENST00000582405 84 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 AC091152.3-201ENST00000604227 325 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 AC107075.1-201ENST00000613695 314 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 AC010133.1-201ENST00000615809 842 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 MTCO1P4-201ENST00000520516 1409 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 MIR16-2-201ENST00000362117 81 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 RNU6-778P-201ENST00000363269 103 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 RNU6-650P-201ENST00000365658 111 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 RNU6-19P-201ENST00000384718 107 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 MIR518A2-201ENST00000384966 87 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
H3F3AP84243 MIR764-201ENST00000390811 85 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.44□□□□□ -2.18
H3F3AP84243 BX510359.4-201ENST00000423750 193 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 AL160275.3-201ENST00000423876 471 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
H3F3AP84243 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.44□□□□□ -2.18
H3F3AP84243 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.44□□□□□ -2.18
H3F3AP84243 FDX1P2-201ENST00000450769 375 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 AC005410.1-202ENST00000460347 485 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 AC069528.1-202ENST00000482888 637 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.44□□□□□ -2.18
H3F3AP84243 RPL22P13-201ENST00000493291 347 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.44□□□□□ -2.18
H3F3AP84243 RNU6-548P-201ENST00000517083 115 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 AP001189.2-201ENST00000527320 189 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 AC125611.1-201ENST00000549563 229 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.44□□□□□ -2.18
H3F3AP84243 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.44□□□□□ -2.18
H3F3AP84243 MIR4789-201ENST00000577469 82 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 MIR4666A-201ENST00000580160 79 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 AP001542.2-201ENST00000593141 364 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.44□□□□□ -2.18
H3F3AP84243 AL078605.1-201ENST00000603529 500 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 AC104763.2-201ENST00000604179 382 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 AL390208.1-201ENST00000605885 644 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 AC009974.1-201ENST00000608881 455 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 AC091953.2-201ENST00000623979 160 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 U2.21-201ENST00000637295 81 ntBASIC1.44□□□□□ -2.18
H3F3AP84243 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
H3F3AP84243 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
H3F3AP84243 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
H3F3AP84243 Z75746.1-201ENST00000440243 2080 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 RNU6-1078P-201ENST00000364522 103 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 RNA5SP190-201ENST00000365222 118 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 RNA5SP240-201ENST00000365355 128 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 RNU6-637P-201ENST00000384050 107 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 MIR506-201ENST00000384998 124 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 DHFRP6-201ENST00000401776 268 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 CCNG1P1-201ENST00000406783 885 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 RN7SKP101-201ENST00000411376 320 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 BTF3P8-201ENST00000414577 526 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.43□□□□□ -2.18
H3F3AP84243 BTF3L4P3-201ENST00000418879 476 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.43□□□□□ -2.18
H3F3AP84243 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.43□□□□□ -2.18
H3F3AP84243 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.43□□□□□ -2.18
H3F3AP84243 PTGES3P1-201ENST00000439531 483 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.43□□□□□ -2.18
H3F3AP84243 AC010468.3-201ENST00000508225 458 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.43□□□□□ -2.18
H3F3AP84243 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.43□□□□□ -2.18
H3F3AP84243 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.43□□□□□ -2.18
H3F3AP84243 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
H3F3AP84243 HSBP1P1-201ENST00000555205 166 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.43□□□□□ -2.18
H3F3AP84243 ZNF971P-201ENST00000562068 1249 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 SEPT7P9-203ENST00000604116 343 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 AC068944.2-201ENST00000610373 403 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 MIR7843-201ENST00000622274 79 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 Z99571.1-201ENST00000636677 394 ntBASIC1.43□□□□□ -2.18
H3F3AP84243 AC006026.1-201ENST00000444025 1803 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms