Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 Y_RNA.245-201ENST00000364493 95 ntBASIC3.39□□□□□ -1.87
RAE1P78406 RNA5SP479-201ENST00000364858 117 ntBASIC3.39□□□□□ -1.87
RAE1P78406 RNU6-1013P-201ENST00000384180 107 ntBASIC3.39□□□□□ -1.87
RAE1P78406 RNU6-45P-201ENST00000384471 107 ntBASIC3.39□□□□□ -1.87
RAE1P78406 HSPE1P26-201ENST00000405341 275 ntBASIC3.39□□□□□ -1.87
RAE1P78406 RN7SKP53-201ENST00000411337 315 ntBASIC3.39□□□□□ -1.87
RAE1P78406 AC063979.1-201ENST00000415539 377 ntBASIC3.39□□□□□ -1.87
RAE1P78406 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.39□□□□□ -1.87
RAE1P78406 AC007919.1-201ENST00000429380 217 ntBASIC3.39□□□□□ -1.87
RAE1P78406 NDUFB4P6-201ENST00000436819 366 ntBASIC3.39□□□□□ -1.87
RAE1P78406 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.39□□□□□ -1.87
RAE1P78406 HMGB1P18-201ENST00000438801 619 ntBASIC3.39□□□□□ -1.87
RAE1P78406 Z82210.1-201ENST00000440037 231 ntBASIC3.39□□□□□ -1.87
RAE1P78406 AL360271.2-201ENST00000447710 161 ntBASIC3.39□□□□□ -1.87
RAE1P78406 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.39□□□□□ -1.87
RAE1P78406 MRPS31P2-201ENST00000451581 518 ntBASIC3.39□□□□□ -1.87
RAE1P78406 PPP1R2P5-201ENST00000457256 603 ntBASIC3.39□□□□□ -1.87
RAE1P78406 AP002812.1-201ENST00000495378 474 ntBASIC3.39□□□□□ -1.87
RAE1P78406 AC009901.1-201ENST00000506703 541 ntBASIC3.39□□□□□ -1.87
RAE1P78406 AC026784.1-201ENST00000507986 352 ntBASIC3.39□□□□□ -1.87
RAE1P78406 RNA5SP290-201ENST00000517133 127 ntBASIC3.39□□□□□ -1.87
RAE1P78406 AP003122.3-201ENST00000526316 255 ntBASIC3.39□□□□□ -1.87
RAE1P78406 AC084851.1-201ENST00000529105 249 ntBASIC3.39□□□□□ -1.87
RAE1P78406 AL157871.3-201ENST00000557231 293 ntBASIC3.39□□□□□ -1.87
RAE1P78406 AC026464.5-201ENST00000562497 722 ntBASIC3.39□□□□□ -1.87
RAE1P78406 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.39□□□□□ -1.87
RAE1P78406 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.39□□□□□ -1.87
RAE1P78406 MIR5692A1-201ENST00000580523 69 ntBASIC3.39□□□□□ -1.87
RAE1P78406 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.39□□□□□ -1.87
RAE1P78406 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.39□□□□□ -1.87
RAE1P78406 RMST_7.1-201ENST00000621935 268 ntBASIC3.39□□□□□ -1.87
RAE1P78406 HSPA8P1-201ENST00000425843 1833 ntBASIC3.39□□□□□ -1.87
RAE1P78406 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RAE1P78406 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RAE1P78406 AL672296.1-201ENST00000427780 2158 ntBASIC3.38□□□□□ -1.87
RAE1P78406 AL359693.1-201ENST00000614959 2407 ntBASIC3.38□□□□□ -1.87
RAE1P78406 RNU6-371P-201ENST00000364283 108 ntBASIC3.38□□□□□ -1.87
RAE1P78406 SNORA4.3-201ENST00000365564 137 ntBASIC3.38□□□□□ -1.87
RAE1P78406 MIR578-201ENST00000384828 96 ntBASIC3.38□□□□□ -1.87
RAE1P78406 Z98941.1-201ENST00000407764 100 ntBASIC3.38□□□□□ -1.87
RAE1P78406 U3.42-201ENST00000408746 214 ntBASIC3.38□□□□□ -1.87
RAE1P78406 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.38□□□□□ -1.87
RAE1P78406 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.38□□□□□ -1.87
RAE1P78406 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.38□□□□□ -1.87
RAE1P78406 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.38□□□□□ -1.87
RAE1P78406 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.38□□□□□ -1.87
RAE1P78406 GPM6BP2-201ENST00000432046 144 ntBASIC3.38□□□□□ -1.87
RAE1P78406 AC073063.1-201ENST00000434352 607 ntBASIC3.38□□□□□ -1.87
RAE1P78406 HMGB1P12-201ENST00000438594 598 ntBASIC3.38□□□□□ -1.87
RAE1P78406 PIGFP3-201ENST00000441918 722 ntBASIC3.38□□□□□ -1.87
RAE1P78406 NOTCH2P1-201ENST00000443481 624 ntBASIC3.38□□□□□ -1.87
RAE1P78406 GPM6BP1-201ENST00000446387 144 ntBASIC3.38□□□□□ -1.87
RAE1P78406 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.38□□□□□ -1.87
RAE1P78406 HMGN2P7-201ENST00000456186 273 ntBASIC3.38□□□□□ -1.87
RAE1P78406 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.38□□□□□ -1.87
RAE1P78406 KC877373.1-201ENST00000479066 408 ntBASIC3.38□□□□□ -1.87
RAE1P78406 RPL30P5-201ENST00000494923 336 ntBASIC3.38□□□□□ -1.87
RAE1P78406 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.38□□□□□ -1.87
RAE1P78406 NDUFB4P9-201ENST00000511646 388 ntBASIC3.38□□□□□ -1.87
RAE1P78406 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RAE1P78406 SNORA14.1-201ENST00000516113 141 ntBASIC3.38□□□□□ -1.87
RAE1P78406 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.38□□□□□ -1.87
RAE1P78406 AP000889.2-201ENST00000532684 490 ntBASIC3.38□□□□□ -1.87
RAE1P78406 MIR1273C-201ENST00000578669 77 ntBASIC3.38□□□□□ -1.87
RAE1P78406 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.38□□□□□ -1.87
RAE1P78406 ATP1B3P1-201ENST00000605365 821 ntBASIC3.38□□□□□ -1.87
RAE1P78406 AC012531.5-201ENST00000611375 151 ntBASIC3.38□□□□□ -1.87
RAE1P78406 DUSP12P1-201ENST00000612874 516 ntBASIC3.38□□□□□ -1.87
RAE1P78406 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.38□□□□□ -1.87
RAE1P78406 AC048347.1-201ENST00000624621 427 ntBASIC3.38□□□□□ -1.87
RAE1P78406 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RAE1P78406 AC090740.1-201ENST00000623193 2262 ntBASIC3.38□□□□□ -1.87
RAE1P78406 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.38□□□□□ -1.87
RAE1P78406 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RAE1P78406 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RAE1P78406 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.38□□□□□ -1.87
RAE1P78406 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RAE1P78406 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.37□□□□□ -1.87
RAE1P78406 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.37□□□□□ -1.87
RAE1P78406 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
RAE1P78406 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RAE1P78406 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RAE1P78406 RNU6-395P-201ENST00000365662 106 ntBASIC3.37□□□□□ -1.87
RAE1P78406 Y_RNA.535-201ENST00000384612 99 ntBASIC3.37□□□□□ -1.87
RAE1P78406 RNU6-1197P-201ENST00000391183 107 ntBASIC3.37□□□□□ -1.87
RAE1P78406 AL445189.1-201ENST00000405722 338 ntBASIC3.37□□□□□ -1.87
RAE1P78406 ATP5A1P2-201ENST00000412323 255 ntBASIC3.37□□□□□ -1.87
RAE1P78406 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.37□□□□□ -1.87
RAE1P78406 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.37□□□□□ -1.87
RAE1P78406 AL158071.1-201ENST00000430315 461 ntBASIC3.37□□□□□ -1.87
RAE1P78406 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.37□□□□□ -1.87
RAE1P78406 RPL7P28-201ENST00000437739 740 ntBASIC3.37□□□□□ -1.87
RAE1P78406 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.37□□□□□ -1.87
RAE1P78406 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.37□□□□□ -1.87
RAE1P78406 RN7SL594P-201ENST00000470590 287 ntBASIC3.37□□□□□ -1.87
RAE1P78406 RPS4XP13-201ENST00000483219 789 ntBASIC3.37□□□□□ -1.87
RAE1P78406 MTCO1P29-201ENST00000496868 288 ntBASIC3.37□□□□□ -1.87
RAE1P78406 AC002456.2-201ENST00000509356 380 ntBASIC3.37□□□□□ -1.87
RAE1P78406 RNU2-27P-201ENST00000516185 142 ntBASIC3.37□□□□□ -1.87
RAE1P78406 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms