Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.77□□□□□ -2.13
TPM4P67936 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.77□□□□□ -2.13
TPM4P67936 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.77□□□□□ -2.13
TPM4P67936 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.77□□□□□ -2.13
TPM4P67936 AC013267.1-201ENST00000458227 267 ntBASIC1.77□□□□□ -2.13
TPM4P67936 AC018437.1-201ENST00000492214 406 ntBASIC1.77□□□□□ -2.13
TPM4P67936 AC104564.1-201ENST00000493028 407 ntBASIC1.77□□□□□ -2.13
TPM4P67936 CKS1BP2-201ENST00000497342 240 ntBASIC1.77□□□□□ -2.13
TPM4P67936 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.77□□□□□ -2.13
TPM4P67936 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.77□□□□□ -2.13
TPM4P67936 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.77□□□□□ -2.13
TPM4P67936 RNU6-714P-201ENST00000516963 103 ntBASIC1.77□□□□□ -2.13
TPM4P67936 HSBP1P1-201ENST00000555205 166 ntBASIC1.77□□□□□ -2.13
TPM4P67936 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.77□□□□□ -2.13
TPM4P67936 BNIP3P23-201ENST00000599655 511 ntBASIC1.77□□□□□ -2.13
TPM4P67936 AF129408.1-201ENST00000608767 431 ntBASIC1.77□□□□□ -2.13
TPM4P67936 AC120349.2-201ENST00000625002 298 ntBASIC1.77□□□□□ -2.13
TPM4P67936 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.77□□□□□ -2.13
TPM4P67936 Z75746.1-201ENST00000440243 2080 ntBASIC1.77□□□□□ -2.13
TPM4P67936 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.77□□□□□ -2.13
TPM4P67936 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TPM4P67936 SNORA40.19-201ENST00000390846 128 ntBASIC1.76□□□□□ -2.13
TPM4P67936 BX664727.1-201ENST00000416024 466 ntBASIC1.76□□□□□ -2.13
TPM4P67936 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.76□□□□□ -2.13
TPM4P67936 AC010153.1-201ENST00000432862 727 ntBASIC1.76□□□□□ -2.13
TPM4P67936 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.76□□□□□ -2.13
TPM4P67936 MTND1P9-201ENST00000453775 944 ntBASIC1.76□□□□□ -2.13
TPM4P67936 AC069528.1-202ENST00000482888 637 ntBASIC1.76□□□□□ -2.13
TPM4P67936 AC010486.1-201ENST00000511793 424 ntBASIC1.76□□□□□ -2.13
TPM4P67936 Y_RNA.675-201ENST00000516389 149 ntBASIC1.76□□□□□ -2.13
TPM4P67936 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
TPM4P67936 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.76□□□□□ -2.13
TPM4P67936 AC090079.2-201ENST00000575289 768 ntBASIC1.76□□□□□ -2.13
TPM4P67936 MIR4648-201ENST00000580107 72 ntBASIC1.76□□□□□ -2.13
TPM4P67936 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.76□□□□□ -2.13
TPM4P67936 AL109620.1-201ENST00000618738 1197 ntBASIC1.76□□□□□ -2.13
TPM4P67936 AL157770.1-201ENST00000623049 439 ntBASIC1.76□□□□□ -2.13
TPM4P67936 AC091953.2-201ENST00000623979 160 ntBASIC1.76□□□□□ -2.13
TPM4P67936 AC019226.1-201ENST00000625666 515 ntBASIC1.76□□□□□ -2.13
TPM4P67936 AC010149.2-201ENST00000637608 315 ntBASIC1.76□□□□□ -2.13
TPM4P67936 LINC02211-204ENST00000642024 1070 ntBASIC1.76□□□□□ -2.13
TPM4P67936 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.76□□□□□ -2.13
TPM4P67936 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
TPM4P67936 UBE2L2-201ENST00000254302 429 ntBASIC1.75□□□□□ -2.13
TPM4P67936 RNU6-754P-201ENST00000391166 107 ntBASIC1.75□□□□□ -2.13
TPM4P67936 OR9R1P-201ENST00000412200 877 ntBASIC1.75□□□□□ -2.13
TPM4P67936 AC097463.2-201ENST00000421074 142 ntBASIC1.75□□□□□ -2.13
TPM4P67936 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.75□□□□□ -2.13
TPM4P67936 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.75□□□□□ -2.13
TPM4P67936 AL161788.1-201ENST00000441805 169 ntBASIC1.75□□□□□ -2.13
TPM4P67936 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.75□□□□□ -2.13
TPM4P67936 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
TPM4P67936 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.75□□□□□ -2.13
TPM4P67936 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.75□□□□□ -2.13
TPM4P67936 RNU6-751P-201ENST00000516382 101 ntBASIC1.75□□□□□ -2.13
TPM4P67936 snoZ278.1-201ENST00000517059 112 ntBASIC1.75□□□□□ -2.13
TPM4P67936 RNA5SP165-201ENST00000517142 115 ntBASIC1.75□□□□□ -2.13
TPM4P67936 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.75□□□□□ -2.13
TPM4P67936 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TPM4P67936 AL121821.2-201ENST00000556081 394 ntBASIC1.75□□□□□ -2.13
TPM4P67936 AL355598.1-201ENST00000604169 202 ntBASIC1.75□□□□□ -2.13
TPM4P67936 MIR8084-201ENST00000614105 89 ntBASIC1.75□□□□□ -2.13
TPM4P67936 AC009268.2-201ENST00000621925 457 ntBASIC1.75□□□□□ -2.13
TPM4P67936 AC109454.4-201ENST00000623411 649 ntBASIC1.75□□□□□ -2.13
TPM4P67936 Z99571.1-201ENST00000636677 394 ntBASIC1.75□□□□□ -2.13
TPM4P67936 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
TPM4P67936 SNORA25B-201ENST00000365507 128 ntBASIC1.74□□□□□ -2.13
TPM4P67936 RNU2-68P-201ENST00000410878 191 ntBASIC1.74□□□□□ -2.13
TPM4P67936 AC007098.1-201ENST00000420122 367 ntBASIC1.74□□□□□ -2.13
TPM4P67936 DPRXP1-201ENST00000426312 460 ntBASIC1.74□□□□□ -2.13
TPM4P67936 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.74□□□□□ -2.13
TPM4P67936 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TPM4P67936 RSU1P2-202ENST00000437884 485 ntBASIC1.74□□□□□ -2.13
TPM4P67936 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.74□□□□□ -2.13
TPM4P67936 AC121161.1-201ENST00000510606 652 ntBASIC1.74□□□□□ -2.13
TPM4P67936 RNU6-927P-201ENST00000516199 100 ntBASIC1.74□□□□□ -2.13
TPM4P67936 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
TPM4P67936 GNAI2P1-201ENST00000541815 315 ntBASIC1.74□□□□□ -2.13
TPM4P67936 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.74□□□□□ -2.13
TPM4P67936 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.74□□□□□ -2.13
TPM4P67936 BNIP3P25-201ENST00000596023 559 ntBASIC1.74□□□□□ -2.13
TPM4P67936 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.74□□□□□ -2.13
TPM4P67936 SEPT7P9-203ENST00000604116 343 ntBASIC1.74□□□□□ -2.13
TPM4P67936 DUSP12P1-201ENST00000612874 516 ntBASIC1.74□□□□□ -2.13
TPM4P67936 AC243773.3-201ENST00000613270 256 ntBASIC1.74□□□□□ -2.13
TPM4P67936 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.74□□□□□ -2.13
TPM4P67936 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TPM4P67936 MTND4P23-201ENST00000447723 1363 ntBASIC1.73□□□□□ -2.13
TPM4P67936 AC006026.1-201ENST00000444025 1803 ntBASIC1.73□□□□□ -2.13
TPM4P67936 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TPM4P67936 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
TPM4P67936 RPL22P22-201ENST00000395439 379 ntBASIC1.73□□□□□ -2.13
TPM4P67936 AL590084.2-201ENST00000401481 382 ntBASIC1.73□□□□□ -2.13
TPM4P67936 TPMTP2-201ENST00000414372 726 ntBASIC1.73□□□□□ -2.13
TPM4P67936 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.73□□□□□ -2.13
TPM4P67936 BX510359.4-201ENST00000423750 193 ntBASIC1.73□□□□□ -2.13
TPM4P67936 BX119904.4-201ENST00000424402 301 ntBASIC1.73□□□□□ -2.13
TPM4P67936 RPL7P34-201ENST00000433316 712 ntBASIC1.73□□□□□ -2.13
TPM4P67936 SEPT7P5-201ENST00000434048 306 ntBASIC1.73□□□□□ -2.13
TPM4P67936 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms