Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.06□□□□□ -2.4
RPL39P62891 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.06□□□□□ -2.4
RPL39P62891 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.06□□□□□ -2.4
RPL39P62891 AL391646.1-201ENST00000603860 190 ntBASIC0.06□□□□□ -2.4
RPL39P62891 FRG1HP-204ENST00000617940 757 ntBASIC0.06□□□□□ -2.4
RPL39P62891 AL118508.4-201ENST00000624142 1176 ntBASIC0.06□□□□□ -2.4
RPL39P62891 MIR6516-201ENST00000630554 81 ntBASIC0.06□□□□□ -2.4
RPL39P62891 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
RPL39P62891 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
RPL39P62891 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
RPL39P62891 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
RPL39P62891 MIR337-201ENST00000362281 93 ntBASIC0.05□□□□□ -2.4
RPL39P62891 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
RPL39P62891 RNU6-968P-201ENST00000384076 107 ntBASIC0.05□□□□□ -2.4
RPL39P62891 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
RPL39P62891 DNAJC19P6-201ENST00000401853 280 ntBASIC0.05□□□□□ -2.4
RPL39P62891 AC069282.1-201ENST00000411911 526 ntBASIC0.05□□□□□ -2.4
RPL39P62891 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
RPL39P62891 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.05□□□□□ -2.4
RPL39P62891 AL591212.2-201ENST00000433923 257 ntBASIC0.05□□□□□ -2.4
RPL39P62891 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.05□□□□□ -2.4
RPL39P62891 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.05□□□□□ -2.4
RPL39P62891 COX6CP6-201ENST00000490840 228 ntBASIC0.05□□□□□ -2.4
RPL39P62891 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
RPL39P62891 AC104806.1-201ENST00000508720 308 ntBASIC0.05□□□□□ -2.4
RPL39P62891 AL359273.1-201ENST00000510918 627 ntBASIC0.05□□□□□ -2.4
RPL39P62891 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.05□□□□□ -2.4
RPL39P62891 AC004923.2-201ENST00000529649 369 ntBASIC0.05□□□□□ -2.4
RPL39P62891 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.05□□□□□ -2.4
RPL39P62891 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.05□□□□□ -2.4
RPL39P62891 AC090888.1-201ENST00000561335 1141 ntBASIC0.05□□□□□ -2.4
RPL39P62891 MIR4711-201ENST00000578274 70 ntBASIC0.05□□□□□ -2.4
RPL39P62891 MIR151B-201ENST00000584249 96 ntBASIC0.05□□□□□ -2.4
RPL39P62891 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.05□□□□□ -2.4
RPL39P62891 AL031274.2-201ENST00000599419 203 ntBASIC0.05□□□□□ -2.4
RPL39P62891 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.05□□□□□ -2.4
RPL39P62891 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
RPL39P62891 AL442644.1-201ENST00000454390 3105 ntBASIC0.05□□□□□ -2.4
RPL39P62891 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
RPL39P62891 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.04□□□□□ -2.4
RPL39P62891 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.04□□□□□ -2.4
RPL39P62891 Y_RNA.191-201ENST00000363972 113 ntBASIC0.04□□□□□ -2.4
RPL39P62891 RNA5SP125-201ENST00000364843 120 ntBASIC0.04□□□□□ -2.4
RPL39P62891 RNU6-198P-201ENST00000384258 104 ntBASIC0.04□□□□□ -2.4
RPL39P62891 MTCO1P56-201ENST00000401674 224 ntBASIC0.04□□□□□ -2.4
RPL39P62891 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.04□□□□□ -2.4
RPL39P62891 AL603825.1-201ENST00000438481 80 ntBASIC0.04□□□□□ -2.4
RPL39P62891 AL353718.1-201ENST00000451028 517 ntBASIC0.04□□□□□ -2.4
RPL39P62891 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC0.04□□□□□ -2.4
RPL39P62891 AC004062.1-201ENST00000509926 645 ntBASIC0.04□□□□□ -2.4
RPL39P62891 SNORA48.10-201ENST00000516965 160 ntBASIC0.04□□□□□ -2.4
RPL39P62891 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.04□□□□□ -2.4
RPL39P62891 AC087465.1-201ENST00000560574 245 ntBASIC0.04□□□□□ -2.4
RPL39P62891 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.04□□□□□ -2.4
RPL39P62891 Z69720.2-201ENST00000624755 279 ntBASIC0.04□□□□□ -2.4
RPL39P62891 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.04□□□□□ -2.4
RPL39P62891 AC010889.1-201ENST00000566193 2666 ntBASIC0.04□□□□□ -2.4
RPL39P62891 AC010329.5-201ENST00000623497 2174 ntBASIC0.04□□□□□ -2.4
RPL39P62891 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
RPL39P62891 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
RPL39P62891 MRPL35P1-201ENST00000404272 572 ntBASIC0.03□□□□□ -2.4
RPL39P62891 RNA5SP193-201ENST00000410353 107 ntBASIC0.03□□□□□ -2.4
RPL39P62891 PNRC2P1-201ENST00000423940 420 ntBASIC0.03□□□□□ -2.4
RPL39P62891 ZNF863P-201ENST00000426746 417 ntBASIC0.03□□□□□ -2.4
RPL39P62891 RPL7L1P10-201ENST00000427790 463 ntBASIC0.03□□□□□ -2.4
RPL39P62891 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.03□□□□□ -2.4
RPL39P62891 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.03□□□□□ -2.4
RPL39P62891 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.03□□□□□ -2.4
RPL39P62891 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
RPL39P62891 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.03□□□□□ -2.4
RPL39P62891 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.03□□□□□ -2.4
RPL39P62891 AC104108.1-201ENST00000509930 412 ntBASIC0.03□□□□□ -2.4
RPL39P62891 AC098591.2-201ENST00000510152 315 ntBASIC0.03□□□□□ -2.4
RPL39P62891 HMGN2P15-201ENST00000585707 270 ntBASIC0.03□□□□□ -2.4
RPL39P62891 HMGN1P30-201ENST00000589286 268 ntBASIC0.03□□□□□ -2.4
RPL39P62891 MIR6134-201ENST00000617606 109 ntBASIC0.03□□□□□ -2.4
RPL39P62891 AC027335.2-201ENST00000624030 375 ntBASIC0.03□□□□□ -2.4
RPL39P62891 AL359740.1-201ENST00000624340 592 ntBASIC0.03□□□□□ -2.4
RPL39P62891 AC090517.3-201ENST00000625170 141 ntBASIC0.03□□□□□ -2.4
RPL39P62891 Z99571.1-201ENST00000636677 394 ntBASIC0.03□□□□□ -2.4
RPL39P62891 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
RPL39P62891 SNORA4.1-201ENST00000364263 144 ntBASIC0.02□□□□□ -2.41
RPL39P62891 MIR936-201ENST00000401264 98 ntBASIC0.02□□□□□ -2.41
RPL39P62891 RNA5SP247-201ENST00000411181 105 ntBASIC0.02□□□□□ -2.41
RPL39P62891 SRIP3-201ENST00000413200 219 ntBASIC0.02□□□□□ -2.41
RPL39P62891 AC009310.1-201ENST00000414414 451 ntBASIC0.02□□□□□ -2.41
RPL39P62891 AL109913.1-201ENST00000421173 514 ntBASIC0.02□□□□□ -2.41
RPL39P62891 VN1R42P-201ENST00000424651 344 ntBASIC0.02□□□□□ -2.41
RPL39P62891 MTND2P29-201ENST00000438595 412 ntBASIC0.02□□□□□ -2.41
RPL39P62891 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.02□□□□□ -2.41
RPL39P62891 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.02□□□□□ -2.41
RPL39P62891 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.02□□□□□ -2.41
RPL39P62891 RNU6-405P-201ENST00000516637 110 ntBASIC0.02□□□□□ -2.41
RPL39P62891 RNU6-467P-201ENST00000517027 110 ntBASIC0.02□□□□□ -2.41
RPL39P62891 AC034114.1-201ENST00000520293 285 ntBASIC0.02□□□□□ -2.41
RPL39P62891 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.02□□□□□ -2.41
RPL39P62891 AC010186.2-204ENST00000537668 439 ntBASIC0.02□□□□□ -2.41
RPL39P62891 AL137100.2-201ENST00000555786 315 ntBASIC0.02□□□□□ -2.41
RPL39P62891 AL133241.1-201ENST00000556832 487 ntBASIC0.02□□□□□ -2.41
RPL39P62891 MIR3126-201ENST00000577443 74 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms