Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.28□□□□□ -1.72
HERVK_113P62684 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HERVK_113P62684 RN7SKP44-201ENST00000363602 316 ntBASIC4.28□□□□□ -1.72
HERVK_113P62684 RPL5P18-201ENST00000406671 891 ntBASIC4.28□□□□□ -1.72
HERVK_113P62684 HSPE1P8-201ENST00000406997 288 ntBASIC4.28□□□□□ -1.72
HERVK_113P62684 MRPS31P2-201ENST00000451581 518 ntBASIC4.28□□□□□ -1.72
HERVK_113P62684 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.28□□□□□ -1.72
HERVK_113P62684 Y_RNA.639-201ENST00000458981 102 ntBASIC4.28□□□□□ -1.72
HERVK_113P62684 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HERVK_113P62684 AC084198.1-201ENST00000477747 402 ntBASIC4.28□□□□□ -1.72
HERVK_113P62684 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.28□□□□□ -1.72
HERVK_113P62684 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.28□□□□□ -1.72
HERVK_113P62684 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.28□□□□□ -1.72
HERVK_113P62684 RNA5SP208-201ENST00000516156 78 ntBASIC4.28□□□□□ -1.72
HERVK_113P62684 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.28□□□□□ -1.72
HERVK_113P62684 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.28□□□□□ -1.72
HERVK_113P62684 AC018630.1-201ENST00000541376 925 ntBASIC4.28□□□□□ -1.72
HERVK_113P62684 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.28□□□□□ -1.72
HERVK_113P62684 AC006116.10-201ENST00000591836 581 ntBASIC4.28□□□□□ -1.72
HERVK_113P62684 AL080274.1-201ENST00000605565 220 ntBASIC4.28□□□□□ -1.72
HERVK_113P62684 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HERVK_113P62684 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.28□□□□□ -1.72
HERVK_113P62684 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HERVK_113P62684 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HERVK_113P62684 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HERVK_113P62684 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HERVK_113P62684 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
HERVK_113P62684 AL365440.1-201ENST00000436135 2167 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.27□□□□□ -1.73
HERVK_113P62684 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.27□□□□□ -1.73
HERVK_113P62684 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HERVK_113P62684 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HERVK_113P62684 AC007685.1-201ENST00000329806 452 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 Y_RNA.146-201ENST00000363549 102 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 RNA5SP50-201ENST00000363731 107 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 Y_RNA.212-201ENST00000364177 102 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 SNORD116-11-201ENST00000383882 92 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 RNU6-76P-201ENST00000384060 104 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 RNU6-434P-201ENST00000384376 107 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 RPS4XP7-201ENST00000406274 780 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.27□□□□□ -1.73
HERVK_113P62684 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.27□□□□□ -1.73
HERVK_113P62684 RPL21P109-201ENST00000422213 475 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 FABP5P14-201ENST00000437273 393 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.27□□□□□ -1.73
HERVK_113P62684 AL645939.1-201ENST00000453429 797 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 BX510359.1-201ENST00000456973 237 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 RPL30P15-201ENST00000457129 321 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 AC090096.1-201ENST00000489168 390 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
HERVK_113P62684 AC093303.1-201ENST00000514549 295 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 RANP9-201ENST00000519957 271 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.27□□□□□ -1.73
HERVK_113P62684 AL163153.1-201ENST00000554223 283 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 AC006270.2-201ENST00000578523 652 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 MIR3941-201ENST00000582572 103 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 SNORD84-203ENST00000584275 78 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 AC023043.2-201ENST00000589678 1026 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.27□□□□□ -1.73
HERVK_113P62684 AC174048.1-201ENST00000603389 144 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.27□□□□□ -1.73
HERVK_113P62684 MIR3651-201ENST00000630427 90 ntBASIC4.27□□□□□ -1.73
HERVK_113P62684 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.27□□□□□ -1.73
HERVK_113P62684 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
HERVK_113P62684 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.27□□□□□ -1.73
HERVK_113P62684 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HERVK_113P62684 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERVK_113P62684 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERVK_113P62684 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERVK_113P62684 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.26□□□□□ -1.73
HERVK_113P62684 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERVK_113P62684 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.26□□□□□ -1.73
HERVK_113P62684 Y_RNA.202-201ENST00000364083 110 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERVK_113P62684 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.26□□□□□ -1.73
HERVK_113P62684 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.26□□□□□ -1.73
HERVK_113P62684 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.26□□□□□ -1.73
HERVK_113P62684 AC079780.1-201ENST00000428259 207 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 Z82205.1-201ENST00000428456 297 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 GPM6BP2-201ENST00000432046 144 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 AL591212.2-201ENST00000433923 257 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.26□□□□□ -1.73
HERVK_113P62684 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.26□□□□□ -1.73
HERVK_113P62684 GPM6BP1-201ENST00000446387 144 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.26□□□□□ -1.73
HERVK_113P62684 RNU6-953P-201ENST00000459154 107 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 RNU7-167P-201ENST00000459160 62 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 AC130509.1-201ENST00000464158 433 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 AC008155.2-201ENST00000464337 397 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 AC104472.2-201ENST00000469035 601 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 VN1R104P-201ENST00000505115 1009 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.26□□□□□ -1.73
HERVK_113P62684 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HERVK_113P62684 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.26□□□□□ -1.73
HERVK_113P62684 RNU2-69P-201ENST00000516061 100 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 SNORA31.22-201ENST00000517204 135 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.26□□□□□ -1.73
HERVK_113P62684 ERHP1-201ENST00000523006 310 ntBASIC4.26□□□□□ -1.73
HERVK_113P62684 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.26□□□□□ -1.73
HERVK_113P62684 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms