Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MIR1302-2-201ENST00000607096 138 ntBASIC2.71□□□□□ -1.98
LMO4P61968 AP002826.1-201ENST00000608835 315 ntBASIC2.71□□□□□ -1.98
LMO4P61968 uc_338.5-201ENST00000611839 155 ntBASIC2.71□□□□□ -1.98
LMO4P61968 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.71□□□□□ -1.98
LMO4P61968 AL157817.1-201ENST00000614264 790 ntBASIC2.71□□□□□ -1.98
LMO4P61968 SNORD39.4-201ENST00000620099 78 ntBASIC2.71□□□□□ -1.98
LMO4P61968 RMST_7.1-201ENST00000621935 268 ntBASIC2.71□□□□□ -1.98
LMO4P61968 TPTEP1-208ENST00000636884 213 ntBASIC2.71□□□□□ -1.98
LMO4P61968 MIR1302-1-201ENST00000637932 143 ntBASIC2.71□□□□□ -1.98
LMO4P61968 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
LMO4P61968 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.71□□□□□ -1.98
LMO4P61968 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
LMO4P61968 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
LMO4P61968 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.7□□□□□ -1.98
LMO4P61968 AL353743.1-202ENST00000431724 1695 ntBASIC2.7□□□□□ -1.98
LMO4P61968 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.7□□□□□ -1.98
LMO4P61968 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LMO4P61968 Y_RNA.22-201ENST00000362492 102 ntBASIC2.7□□□□□ -1.98
LMO4P61968 Y_RNA.67-201ENST00000362870 100 ntBASIC2.7□□□□□ -1.98
LMO4P61968 Y_RNA.184-201ENST00000363884 108 ntBASIC2.7□□□□□ -1.98
LMO4P61968 RNU6-996P-201ENST00000365438 107 ntBASIC2.7□□□□□ -1.98
LMO4P61968 RNY3P13-201ENST00000365542 102 ntBASIC2.7□□□□□ -1.98
LMO4P61968 RNU6-1227P-201ENST00000383981 107 ntBASIC2.7□□□□□ -1.98
LMO4P61968 Y_RNA.419-201ENST00000384041 102 ntBASIC2.7□□□□□ -1.98
LMO4P61968 SNORA32.2-201ENST00000384049 122 ntBASIC2.7□□□□□ -1.98
LMO4P61968 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LMO4P61968 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.7□□□□□ -1.98
LMO4P61968 MTCYBP8-201ENST00000422855 651 ntBASIC2.7□□□□□ -1.98
LMO4P61968 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LMO4P61968 AL158071.1-201ENST00000430315 461 ntBASIC2.7□□□□□ -1.98
LMO4P61968 OR4K11P-201ENST00000431829 904 ntBASIC2.7□□□□□ -1.98
LMO4P61968 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.7□□□□□ -1.98
LMO4P61968 AL353705.1-201ENST00000433468 480 ntBASIC2.7□□□□□ -1.98
LMO4P61968 AC024082.2-201ENST00000434771 238 ntBASIC2.7□□□□□ -1.98
LMO4P61968 RPS20P5-201ENST00000434808 360 ntBASIC2.7□□□□□ -1.98
LMO4P61968 UBE2V1P13-201ENST00000436983 439 ntBASIC2.7□□□□□ -1.98
LMO4P61968 RPL7P28-201ENST00000437739 740 ntBASIC2.7□□□□□ -1.98
LMO4P61968 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.7□□□□□ -1.98
LMO4P61968 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.7□□□□□ -1.98
LMO4P61968 DDX3P2-201ENST00000446138 111 ntBASIC2.7□□□□□ -1.98
LMO4P61968 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.7□□□□□ -1.98
LMO4P61968 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.7□□□□□ -1.98
LMO4P61968 HMGN2P26-201ENST00000463169 339 ntBASIC2.7□□□□□ -1.98
LMO4P61968 AC006512.1-201ENST00000468816 291 ntBASIC2.7□□□□□ -1.98
LMO4P61968 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LMO4P61968 RPS27AP1-201ENST00000475545 471 ntBASIC2.7□□□□□ -1.98
LMO4P61968 RPL7P23-201ENST00000493874 747 ntBASIC2.7□□□□□ -1.98
LMO4P61968 AC026801.2-201ENST00000515352 425 ntBASIC2.7□□□□□ -1.98
LMO4P61968 RNU6-1314P-201ENST00000517139 104 ntBASIC2.7□□□□□ -1.98
LMO4P61968 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.7□□□□□ -1.98
LMO4P61968 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.7□□□□□ -1.98
LMO4P61968 AC087241.2-201ENST00000535801 324 ntBASIC2.7□□□□□ -1.98
LMO4P61968 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.7□□□□□ -1.98
LMO4P61968 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.7□□□□□ -1.98
LMO4P61968 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.7□□□□□ -1.98
LMO4P61968 SETP2-201ENST00000553886 926 ntBASIC2.7□□□□□ -1.98
LMO4P61968 SCOCP1-201ENST00000554676 349 ntBASIC2.7□□□□□ -1.98
LMO4P61968 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.7□□□□□ -1.98
LMO4P61968 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.7□□□□□ -1.98
LMO4P61968 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.7□□□□□ -1.98
LMO4P61968 AC106900.2-201ENST00000604994 317 ntBASIC2.7□□□□□ -1.98
LMO4P61968 AL121992.2-201ENST00000606262 256 ntBASIC2.7□□□□□ -1.98
LMO4P61968 AC103710.2-201ENST00000609912 942 ntBASIC2.7□□□□□ -1.98
LMO4P61968 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.7□□□□□ -1.98
LMO4P61968 PART1_1.1-201ENST00000611761 217 ntBASIC2.7□□□□□ -1.98
LMO4P61968 uc_338.1-201ENST00000612113 180 ntBASIC2.7□□□□□ -1.98
LMO4P61968 XIST_intron.1-201ENST00000619444 68 ntBASIC2.7□□□□□ -1.98
LMO4P61968 PLCE1P1-201ENST00000622094 305 ntBASIC2.7□□□□□ -1.98
LMO4P61968 AC110801.1-201ENST00000623590 212 ntBASIC2.7□□□□□ -1.98
LMO4P61968 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.7□□□□□ -1.98
LMO4P61968 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
LMO4P61968 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
LMO4P61968 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LMO4P61968 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.69□□□□□ -1.98
LMO4P61968 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
LMO4P61968 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
LMO4P61968 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.69□□□□□ -1.98
LMO4P61968 RNU4-48P-201ENST00000365559 182 ntBASIC2.69□□□□□ -1.98
LMO4P61968 RNU4-20P-201ENST00000365601 151 ntBASIC2.69□□□□□ -1.98
LMO4P61968 RNU6-692P-201ENST00000384496 107 ntBASIC2.69□□□□□ -1.98
LMO4P61968 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.69□□□□□ -1.98
LMO4P61968 AL356968.1-201ENST00000416622 474 ntBASIC2.69□□□□□ -1.98
LMO4P61968 AL645937.1-202ENST00000421799 937 ntBASIC2.69□□□□□ -1.98
LMO4P61968 AC002075.2-201ENST00000425207 252 ntBASIC2.69□□□□□ -1.98
LMO4P61968 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.69□□□□□ -1.98
LMO4P61968 HMGN2P20-201ENST00000437531 273 ntBASIC2.69□□□□□ -1.98
LMO4P61968 AC093156.1-201ENST00000440382 670 ntBASIC2.69□□□□□ -1.98
LMO4P61968 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.69□□□□□ -1.98
LMO4P61968 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.69□□□□□ -1.98
LMO4P61968 RN7SL863P-201ENST00000462370 296 ntBASIC2.69□□□□□ -1.98
LMO4P61968 GMFBP1-201ENST00000467831 427 ntBASIC2.69□□□□□ -1.98
LMO4P61968 RPL27AP5-201ENST00000469428 449 ntBASIC2.69□□□□□ -1.98
LMO4P61968 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.69□□□□□ -1.98
LMO4P61968 AC006445.1-201ENST00000491925 405 ntBASIC2.69□□□□□ -1.98
LMO4P61968 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.69□□□□□ -1.98
LMO4P61968 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.69□□□□□ -1.98
LMO4P61968 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.69□□□□□ -1.98
LMO4P61968 AP003072.1-201ENST00000531740 145 ntBASIC2.69□□□□□ -1.98
LMO4P61968 OR5BN1P-201ENST00000532955 829 ntBASIC2.69□□□□□ -1.98
LMO4P61968 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms