Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MTND1P24-201ENST00000552175 861 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 AC121758.2-201ENST00000553271 193 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 MIR3200-201ENST00000580767 85 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 KC877982.1-201ENST00000602313 470 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 AC090970.3-201ENST00000612566 866 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.27□□□□□ -2.05
PKNOX1P55347 MIR7515-201ENST00000637837 67 ntBASIC2.27□□□□□ -2.05
PKNOX1P55347 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PKNOX1P55347 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PKNOX1P55347 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PKNOX1P55347 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.26□□□□□ -2.05
PKNOX1P55347 AC010329.5-201ENST00000623497 2174 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PKNOX1P55347 RNU6-500P-201ENST00000362349 107 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 SNORA80A-201ENST00000363922 136 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 RNY3P13-201ENST00000365542 102 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 RNU6-701P-201ENST00000384059 107 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 RNU6-809P-201ENST00000384461 107 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 MIR524-201ENST00000385242 87 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 RNU2-68P-201ENST00000410878 191 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 RNU6-1328P-201ENST00000410938 106 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.26□□□□□ -2.05
PKNOX1P55347 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.26□□□□□ -2.05
PKNOX1P55347 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.26□□□□□ -2.05
PKNOX1P55347 AC104651.1-201ENST00000427559 735 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 WARS2P1-201ENST00000429678 537 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.26□□□□□ -2.05
PKNOX1P55347 GPM6BP2-201ENST00000432046 144 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.26□□□□□ -2.05
PKNOX1P55347 RPL37P21-201ENST00000435890 276 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 AL008629.1-201ENST00000438615 184 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 AC098831.1-201ENST00000440661 216 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.26□□□□□ -2.05
PKNOX1P55347 GPM6BP1-201ENST00000446387 144 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.26□□□□□ -2.05
PKNOX1P55347 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.26□□□□□ -2.05
PKNOX1P55347 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.26□□□□□ -2.05
PKNOX1P55347 AC022447.1-201ENST00000515358 464 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 RNA5SP148-201ENST00000516527 94 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 RNU6-201P-201ENST00000517100 61 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 AC107934.1-201ENST00000522215 217 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 AC021269.2-201ENST00000532318 330 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 AP000889.2-201ENST00000532684 490 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PKNOX1P55347 EIF4BP1-201ENST00000554881 351 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PKNOX1P55347 MIR5007-201ENST00000583098 95 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.26□□□□□ -2.05
PKNOX1P55347 MIR3117-201ENST00000584034 78 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.26□□□□□ -2.05
PKNOX1P55347 AC022022.2-201ENST00000602989 360 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 AC006023.1-201ENST00000603944 259 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 AL358072.1-201ENST00000604156 575 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 AP000860.1-201ENST00000605250 559 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 AL589743.7-201ENST00000612637 233 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 DUSP12P1-201ENST00000612874 516 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 uc_338.12-201ENST00000616344 181 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 AC079416.3-201ENST00000624479 549 ntBASIC2.26□□□□□ -2.05
PKNOX1P55347 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
PKNOX1P55347 AC104454.1-201ENST00000421341 1401 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PKNOX1P55347 MIRLET7G-201ENST00000362280 84 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 RNU6-511P-201ENST00000363496 107 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AL021407.1-201ENST00000404531 386 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.25□□□□□ -2.05
PKNOX1P55347 RPL26P27-201ENST00000414397 437 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 ELOCP17-201ENST00000414751 326 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.25□□□□□ -2.05
PKNOX1P55347 HIGD1AP15-201ENST00000416198 280 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 SEPT2P1-201ENST00000419651 180 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AC011233.1-201ENST00000422812 283 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AL593851.1-201ENST00000426171 157 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PKNOX1P55347 MED14P1-201ENST00000430517 648 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 RPL36AP53-201ENST00000432891 316 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.25□□□□□ -2.05
PKNOX1P55347 AC118469.1-201ENST00000442943 488 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.25□□□□□ -2.05
PKNOX1P55347 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.25□□□□□ -2.05
PKNOX1P55347 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.25□□□□□ -2.05
PKNOX1P55347 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.25□□□□□ -2.05
PKNOX1P55347 AC139453.3-201ENST00000493276 369 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 EIF4EP3-201ENST00000498782 656 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.25□□□□□ -2.05
PKNOX1P55347 AC234781.5-201ENST00000508429 271 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.25□□□□□ -2.05
PKNOX1P55347 RNU5F-8P-201ENST00000515941 111 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 RNU6-678P-201ENST00000516832 109 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 ARL2BPP2-201ENST00000550907 489 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 RPS3AP4-201ENST00000555161 764 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 ZNF519P3-201ENST00000557158 1032 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AC091489.2-201ENST00000566263 604 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AC002400.1-201ENST00000569310 726 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.25□□□□□ -2.05
PKNOX1P55347 MIR4760-201ENST00000585040 80 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AL356280.1-201ENST00000603614 379 ntBASIC2.25□□□□□ -2.05
PKNOX1P55347 AC007363.1-201ENST00000604736 620 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms