Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA2D1P54289 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA2D1P54289 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA2D1P54289 SAGE4P-201ENST00000442271 3381 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 AL359893.1-201ENST00000447628 1580 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 Y_RNA.197-201ENST00000364004 102 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 RNU6-61P-201ENST00000365528 109 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 Y_RNA.395-201ENST00000383945 109 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 RNU6-574P-201ENST00000384265 107 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 Y_RNA.576-201ENST00000384781 102 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 MIR183-201ENST00000384958 110 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CACNA2D1P54289 MTHFD2P2-201ENST00000407725 247 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 RPL37P10-201ENST00000412884 288 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 PMCHL1-202ENST00000423102 261 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA2D1P54289 AC073063.1-201ENST00000434352 607 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.78□□□□□ -1.8
CACNA2D1P54289 AC010655.1-201ENST00000449336 292 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 ANP32BP2-201ENST00000454525 545 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA2D1P54289 RN7SL293P-201ENST00000481765 281 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.78□□□□□ -1.8
CACNA2D1P54289 RNU6-566P-201ENST00000516790 107 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA2D1P54289 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.78□□□□□ -1.8
CACNA2D1P54289 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA2D1P54289 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA2D1P54289 AL137161.1-201ENST00000532231 390 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 MIR4790-201ENST00000577799 79 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 MIR4425-201ENST00000580572 84 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.78□□□□□ -1.8
CACNA2D1P54289 AC006077.1-201ENST00000604746 343 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 AC106900.2-201ENST00000604994 317 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 AC243312.2-201ENST00000623340 601 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 U6.105-201ENST00000637379 88 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA2D1P54289 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CACNA2D1P54289 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA2D1P54289 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CACNA2D1P54289 CEP170P1-201ENST00000502249 4587 ntBASIC3.78□□□□□ -1.8
CACNA2D1P54289 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CACNA2D1P54289 AL365440.1-201ENST00000436135 2167 ntBASIC3.78□□□□□ -1.81
CACNA2D1P54289 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA2D1P54289 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA2D1P54289 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA2D1P54289 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.77□□□□□ -1.81
CACNA2D1P54289 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA2D1P54289 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.77□□□□□ -1.81
CACNA2D1P54289 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CACNA2D1P54289 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA2D1P54289 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA2D1P54289 MIR208A-201ENST00000362287 71 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 RNU6-1287P-201ENST00000362914 107 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 Y_RNA.187-201ENST00000363918 113 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 RNU6-639P-201ENST00000384074 107 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 SNORD51-201ENST00000384320 80 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 RNU6-1060P-201ENST00000384664 107 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 AL592114.1-201ENST00000403842 483 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 RN7SKP158-201ENST00000410453 326 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 RNU6-516P-201ENST00000411381 104 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.77□□□□□ -1.81
CACNA2D1P54289 AC005094.1-201ENST00000440420 368 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.77□□□□□ -1.81
CACNA2D1P54289 SNORD105B-201ENST00000458770 79 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.77□□□□□ -1.81
CACNA2D1P54289 AC104806.1-201ENST00000508720 308 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 AC110768.1-201ENST00000509222 400 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 AC090136.1-201ENST00000520009 240 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA2D1P54289 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA2D1P54289 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.77□□□□□ -1.81
CACNA2D1P54289 MIR3672-201ENST00000584290 82 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 AC092747.3-201ENST00000603769 301 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 U3.45-201ENST00000607547 219 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 AC022893.3-201ENST00000607665 437 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.77□□□□□ -1.81
CACNA2D1P54289 uc_338.22-201ENST00000622722 187 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.77□□□□□ -1.81
CACNA2D1P54289 AC066616.2-201ENST00000559334 1481 ntBASIC3.77□□□□□ -1.81
CACNA2D1P54289 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA2D1P54289 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA2D1P54289 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CACNA2D1P54289 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.77□□□□□ -1.81
CACNA2D1P54289 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.77□□□□□ -1.81
CACNA2D1P54289 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.76□□□□□ -1.81
CACNA2D1P54289 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
CACNA2D1P54289 API5P2-201ENST00000397055 1498 ntBASIC3.76□□□□□ -1.81
CACNA2D1P54289 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.76□□□□□ -1.81
CACNA2D1P54289 SNORD113-7-201ENST00000363762 77 ntBASIC3.76□□□□□ -1.81
CACNA2D1P54289 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.76□□□□□ -1.81
CACNA2D1P54289 RNU6-432P-201ENST00000384196 109 ntBASIC3.76□□□□□ -1.81
CACNA2D1P54289 Y_RNA.493-201ENST00000384422 102 ntBASIC3.76□□□□□ -1.81
CACNA2D1P54289 MIR218-2-201ENST00000385006 110 ntBASIC3.76□□□□□ -1.81
CACNA2D1P54289 AL356057.3-201ENST00000402607 340 ntBASIC3.76□□□□□ -1.81
CACNA2D1P54289 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.76□□□□□ -1.81
CACNA2D1P54289 RPL7P46-201ENST00000425129 740 ntBASIC3.76□□□□□ -1.81
CACNA2D1P54289 AL159987.2-201ENST00000432754 307 ntBASIC3.76□□□□□ -1.81
CACNA2D1P54289 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms