Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC068657.1-201ENST00000520807 306 ntBASIC2.93□□□□□ -1.94
PDX1P52945 AC016957.1-201ENST00000534895 309 ntBASIC2.93□□□□□ -1.94
PDX1P52945 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.93□□□□□ -1.94
PDX1P52945 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.93□□□□□ -1.94
PDX1P52945 MIR3162-201ENST00000581818 82 ntBASIC2.93□□□□□ -1.94
PDX1P52945 AC025449.1-201ENST00000603896 529 ntBASIC2.93□□□□□ -1.94
PDX1P52945 AL161798.1-201ENST00000604630 131 ntBASIC2.93□□□□□ -1.94
PDX1P52945 AC068831.7-201ENST00000616954 363 ntBASIC2.93□□□□□ -1.94
PDX1P52945 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PDX1P52945 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.93□□□□□ -1.94
PDX1P52945 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PDX1P52945 AL049641.1-201ENST00000441055 1948 ntBASIC2.93□□□□□ -1.94
PDX1P52945 MTND5P27-201ENST00000428871 1720 ntBASIC2.93□□□□□ -1.94
PDX1P52945 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.93□□□□□ -1.94
PDX1P52945 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PDX1P52945 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
PDX1P52945 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PDX1P52945 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
PDX1P52945 UBE2L2-201ENST00000254302 429 ntBASIC2.92□□□□□ -1.94
PDX1P52945 AC073343.1-201ENST00000328239 651 ntBASIC2.92□□□□□ -1.94
PDX1P52945 MIR148B-201ENST00000362252 99 ntBASIC2.92□□□□□ -1.94
PDX1P52945 RNU6-1167P-201ENST00000363227 94 ntBASIC2.92□□□□□ -1.94
PDX1P52945 U3.6-201ENST00000363622 211 ntBASIC2.92□□□□□ -1.94
PDX1P52945 RNU6-512P-201ENST00000364438 103 ntBASIC2.92□□□□□ -1.94
PDX1P52945 RNA5SP126-201ENST00000365092 109 ntBASIC2.92□□□□□ -1.94
PDX1P52945 RNU6-1103P-201ENST00000384150 107 ntBASIC2.92□□□□□ -1.94
PDX1P52945 SNORA24.1-201ENST00000384401 135 ntBASIC2.92□□□□□ -1.94
PDX1P52945 Y_RNA.516-201ENST00000384541 124 ntBASIC2.92□□□□□ -1.94
PDX1P52945 SNORA48.8-201ENST00000391324 134 ntBASIC2.92□□□□□ -1.94
PDX1P52945 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.92□□□□□ -1.94
PDX1P52945 RNU2-9P-201ENST00000410194 145 ntBASIC2.92□□□□□ -1.94
PDX1P52945 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.92□□□□□ -1.94
PDX1P52945 AL353193.1-201ENST00000421444 268 ntBASIC2.92□□□□□ -1.94
PDX1P52945 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.92□□□□□ -1.94
PDX1P52945 C8orf59P1-201ENST00000429930 303 ntBASIC2.92□□□□□ -1.94
PDX1P52945 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.92□□□□□ -1.94
PDX1P52945 AC107401.1-201ENST00000503426 685 ntBASIC2.92□□□□□ -1.94
PDX1P52945 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.92□□□□□ -1.94
PDX1P52945 RN7SKP132-201ENST00000516001 208 ntBASIC2.92□□□□□ -1.94
PDX1P52945 SNORD27.1-201ENST00000516319 72 ntBASIC2.92□□□□□ -1.94
PDX1P52945 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.92□□□□□ -1.94
PDX1P52945 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PDX1P52945 AL365204.3-201ENST00000612448 685 ntBASIC2.92□□□□□ -1.94
PDX1P52945 AC130324.3-201ENST00000614165 542 ntBASIC2.92□□□□□ -1.94
PDX1P52945 AC034102.8-201ENST00000615146 484 ntBASIC2.92□□□□□ -1.94
PDX1P52945 AL359740.1-201ENST00000624340 592 ntBASIC2.92□□□□□ -1.94
PDX1P52945 AC009161.2-201ENST00000624626 138 ntBASIC2.92□□□□□ -1.94
PDX1P52945 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.92□□□□□ -1.94
PDX1P52945 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.92□□□□□ -1.94
PDX1P52945 MTND5P42-201ENST00000637720 498 ntBASIC2.92□□□□□ -1.94
PDX1P52945 AC099654.12-201ENST00000639868 649 ntBASIC2.92□□□□□ -1.94
PDX1P52945 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.92□□□□□ -1.94
PDX1P52945 AL136164.4-201ENST00000625013 2135 ntBASIC2.92□□□□□ -1.94
PDX1P52945 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PDX1P52945 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.92□□□□□ -1.94
PDX1P52945 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PDX1P52945 AL137003.2-201ENST00000606924 2538 ntBASIC2.91□□□□□ -1.94
PDX1P52945 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PDX1P52945 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PDX1P52945 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PDX1P52945 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.91□□□□□ -1.94
PDX1P52945 Y_RNA.1-201ENST00000352915 104 ntBASIC2.91□□□□□ -1.94
PDX1P52945 MIR449A-201ENST00000362113 91 ntBASIC2.91□□□□□ -1.94
PDX1P52945 RNA5SP295-201ENST00000362655 121 ntBASIC2.91□□□□□ -1.94
PDX1P52945 RNU6-270P-201ENST00000364131 105 ntBASIC2.91□□□□□ -1.94
PDX1P52945 Y_RNA.381-201ENST00000365666 102 ntBASIC2.91□□□□□ -1.94
PDX1P52945 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PDX1P52945 RNU6-190P-201ENST00000384154 102 ntBASIC2.91□□□□□ -1.94
PDX1P52945 RNU6-817P-201ENST00000391083 104 ntBASIC2.91□□□□□ -1.94
PDX1P52945 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PDX1P52945 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.91□□□□□ -1.94
PDX1P52945 AC002486.1-201ENST00000435098 391 ntBASIC2.91□□□□□ -1.94
PDX1P52945 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.91□□□□□ -1.94
PDX1P52945 RPS12P18-201ENST00000442381 270 ntBASIC2.91□□□□□ -1.94
PDX1P52945 RPS24P13-201ENST00000442520 397 ntBASIC2.91□□□□□ -1.94
PDX1P52945 AC079781.2-201ENST00000446424 169 ntBASIC2.91□□□□□ -1.94
PDX1P52945 AL590664.1-201ENST00000448065 339 ntBASIC2.91□□□□□ -1.94
PDX1P52945 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.91□□□□□ -1.94
PDX1P52945 AC087588.1-201ENST00000462203 316 ntBASIC2.91□□□□□ -1.94
PDX1P52945 MRPS17P3-201ENST00000465453 385 ntBASIC2.91□□□□□ -1.94
PDX1P52945 RPL30P14-201ENST00000482744 348 ntBASIC2.91□□□□□ -1.94
PDX1P52945 AC116562.3-201ENST00000506136 177 ntBASIC2.91□□□□□ -1.94
PDX1P52945 AC117522.1-201ENST00000509821 380 ntBASIC2.91□□□□□ -1.94
PDX1P52945 AC108078.2-201ENST00000510750 236 ntBASIC2.91□□□□□ -1.94
PDX1P52945 RNU6-928P-201ENST00000516876 104 ntBASIC2.91□□□□□ -1.94
PDX1P52945 RN7SKP272-201ENST00000516988 232 ntBASIC2.91□□□□□ -1.94
PDX1P52945 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PDX1P52945 MTCYBP20-201ENST00000524239 1129 ntBASIC2.91□□□□□ -1.94
PDX1P52945 AC068587.5-201ENST00000528506 175 ntBASIC2.91□□□□□ -1.94
PDX1P52945 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.91□□□□□ -1.94
PDX1P52945 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.91□□□□□ -1.94
PDX1P52945 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.91□□□□□ -1.94
PDX1P52945 TRAV37-201ENST00000553906 342 ntBASIC2.91□□□□□ -1.94
PDX1P52945 AC136601.2-201ENST00000604356 474 ntBASIC2.91□□□□□ -1.94
PDX1P52945 AC012557.2-201ENST00000605919 418 ntBASIC2.91□□□□□ -1.94
PDX1P52945 AL158209.2-201ENST00000619266 216 ntBASIC2.91□□□□□ -1.94
PDX1P52945 MIR6863-201ENST00000636112 90 ntBASIC2.91□□□□□ -1.94
PDX1P52945 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PDX1P52945 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PDX1P52945 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms