Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.46□□□□□ -2.02
MSH6P52701 EEF1E1P1-201ENST00000446998 430 ntBASIC2.46□□□□□ -2.02
MSH6P52701 SNRPGP6-201ENST00000451124 220 ntBASIC2.46□□□□□ -2.02
MSH6P52701 MTND1P9-201ENST00000453775 944 ntBASIC2.46□□□□□ -2.02
MSH6P52701 AC055855.1-201ENST00000489563 579 ntBASIC2.46□□□□□ -2.02
MSH6P52701 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.46□□□□□ -2.02
MSH6P52701 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.46□□□□□ -2.02
MSH6P52701 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.46□□□□□ -2.02
MSH6P52701 AC121758.2-201ENST00000553271 193 ntBASIC2.46□□□□□ -2.02
MSH6P52701 AC106052.1-201ENST00000608029 497 ntBASIC2.46□□□□□ -2.02
MSH6P52701 AL136370.1-201ENST00000608166 691 ntBASIC2.46□□□□□ -2.02
MSH6P52701 AC245297.2-201ENST00000610119 565 ntBASIC2.46□□□□□ -2.02
MSH6P52701 AC008443.7-201ENST00000622195 246 ntBASIC2.46□□□□□ -2.02
MSH6P52701 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.46□□□□□ -2.02
MSH6P52701 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
MSH6P52701 AL359740.1-201ENST00000624340 592 ntBASIC2.46□□□□□ -2.02
MSH6P52701 MAPK10-266ENST00000641066 6555 ntBASIC2.46□□□□□ -2.02
MSH6P52701 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
MSH6P52701 TPTE2P4-201ENST00000258589 1605 ntBASIC2.45□□□□□ -2.02
MSH6P52701 AP000776.1-201ENST00000530032 1663 ntBASIC2.45□□□□□ -2.02
MSH6P52701 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.45□□□□□ -2.02
MSH6P52701 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
MSH6P52701 RNU6-97P-201ENST00000363387 104 ntBASIC2.45□□□□□ -2.02
MSH6P52701 RNU6-1078P-201ENST00000364522 103 ntBASIC2.45□□□□□ -2.02
MSH6P52701 RNA5SP138-201ENST00000365098 114 ntBASIC2.45□□□□□ -2.02
MSH6P52701 MIR514A1-201ENST00000385133 98 ntBASIC2.45□□□□□ -2.02
MSH6P52701 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
MSH6P52701 AL356057.2-201ENST00000403318 432 ntBASIC2.45□□□□□ -2.02
MSH6P52701 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.45□□□□□ -2.02
MSH6P52701 AC106883.1-201ENST00000418805 562 ntBASIC2.45□□□□□ -2.02
MSH6P52701 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.45□□□□□ -2.02
MSH6P52701 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.45□□□□□ -2.02
MSH6P52701 RPS25P9-201ENST00000435591 252 ntBASIC2.45□□□□□ -2.02
MSH6P52701 COX7BP2-201ENST00000437976 242 ntBASIC2.45□□□□□ -2.02
MSH6P52701 AC004854.1-201ENST00000440356 349 ntBASIC2.45□□□□□ -2.02
MSH6P52701 AC009474.2-201ENST00000451383 136 ntBASIC2.45□□□□□ -2.02
MSH6P52701 MEMO1P3-201ENST00000459811 302 ntBASIC2.45□□□□□ -2.02
MSH6P52701 AC104563.1-201ENST00000476147 376 ntBASIC2.45□□□□□ -2.02
MSH6P52701 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.45□□□□□ -2.02
MSH6P52701 AC108729.1-201ENST00000487812 947 ntBASIC2.45□□□□□ -2.02
MSH6P52701 AC092436.3-201ENST00000511788 257 ntBASIC2.45□□□□□ -2.02
MSH6P52701 RPPH1-2P-201ENST00000516688 293 ntBASIC2.45□□□□□ -2.02
MSH6P52701 RNU6-1282P-201ENST00000516735 96 ntBASIC2.45□□□□□ -2.02
MSH6P52701 HMGB1P14-201ENST00000557424 591 ntBASIC2.45□□□□□ -2.02
MSH6P52701 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.45□□□□□ -2.02
MSH6P52701 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.45□□□□□ -2.02
MSH6P52701 AC013553.2-201ENST00000604244 589 ntBASIC2.45□□□□□ -2.02
MSH6P52701 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.45□□□□□ -2.02
MSH6P52701 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.45□□□□□ -2.02
MSH6P52701 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.44□□□□□ -2.02
MSH6P52701 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
MSH6P52701 SDAD1P2-201ENST00000441308 2028 ntBASIC2.44□□□□□ -2.02
MSH6P52701 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
MSH6P52701 ZNF29P-201ENST00000225587 168 ntBASIC2.44□□□□□ -2.02
MSH6P52701 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
MSH6P52701 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
MSH6P52701 RNU6-270P-201ENST00000364131 105 ntBASIC2.44□□□□□ -2.02
MSH6P52701 AL356421.1-201ENST00000403255 413 ntBASIC2.44□□□□□ -2.02
MSH6P52701 TPMTP3-201ENST00000411928 735 ntBASIC2.44□□□□□ -2.02
MSH6P52701 MTCO2P8-201ENST00000412213 658 ntBASIC2.44□□□□□ -2.02
MSH6P52701 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.44□□□□□ -2.02
MSH6P52701 SNRPEP7-201ENST00000438350 220 ntBASIC2.44□□□□□ -2.02
MSH6P52701 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.44□□□□□ -2.02
MSH6P52701 DPPA3P1-201ENST00000448050 469 ntBASIC2.44□□□□□ -2.02
MSH6P52701 AL009048.1-201ENST00000450437 298 ntBASIC2.44□□□□□ -2.02
MSH6P52701 RNU6-420P-201ENST00000458780 107 ntBASIC2.44□□□□□ -2.02
MSH6P52701 AC021382.1-201ENST00000483523 359 ntBASIC2.44□□□□□ -2.02
MSH6P52701 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.44□□□□□ -2.02
MSH6P52701 AC024589.1-201ENST00000512207 263 ntBASIC2.44□□□□□ -2.02
MSH6P52701 SCARNA15.2-201ENST00000516409 127 ntBASIC2.44□□□□□ -2.02
MSH6P52701 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.44□□□□□ -2.02
MSH6P52701 ARL2BPP2-201ENST00000550907 489 ntBASIC2.44□□□□□ -2.02
MSH6P52701 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.44□□□□□ -2.02
MSH6P52701 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.44□□□□□ -2.02
MSH6P52701 MIR4452-201ENST00000583004 71 ntBASIC2.44□□□□□ -2.02
MSH6P52701 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.44□□□□□ -2.02
MSH6P52701 AC080013.3-201ENST00000606839 578 ntBASIC2.44□□□□□ -2.02
MSH6P52701 AL603758.1-201ENST00000618654 241 ntBASIC2.44□□□□□ -2.02
MSH6P52701 MIR4275-201ENST00000636486 87 ntBASIC2.44□□□□□ -2.02
MSH6P52701 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.43□□□□□ -2.02
MSH6P52701 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
MSH6P52701 MTND5P35-201ENST00000557537 1720 ntBASIC2.43□□□□□ -2.02
MSH6P52701 RNU6-289P-201ENST00000364093 107 ntBASIC2.43□□□□□ -2.02
MSH6P52701 RNU6-637P-201ENST00000384050 107 ntBASIC2.43□□□□□ -2.02
MSH6P52701 RNU6-754P-201ENST00000391166 107 ntBASIC2.43□□□□□ -2.02
MSH6P52701 MTND1P21-201ENST00000412991 285 ntBASIC2.43□□□□□ -2.02
MSH6P52701 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.43□□□□□ -2.02
MSH6P52701 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.43□□□□□ -2.02
MSH6P52701 AC092155.2-201ENST00000454675 477 ntBASIC2.43□□□□□ -2.02
MSH6P52701 HMGB1P36-201ENST00000487709 576 ntBASIC2.43□□□□□ -2.02
MSH6P52701 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.43□□□□□ -2.02
MSH6P52701 AC090255.1-201ENST00000495779 349 ntBASIC2.43□□□□□ -2.02
MSH6P52701 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
MSH6P52701 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.43□□□□□ -2.02
MSH6P52701 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.43□□□□□ -2.02
MSH6P52701 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.43□□□□□ -2.02
MSH6P52701 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.43□□□□□ -2.02
MSH6P52701 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.43□□□□□ -2.02
MSH6P52701 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.43□□□□□ -2.02
MSH6P52701 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms