Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDK7P50613 RNU6-1090P-201ENST00000364065 94 ntBASIC3.57□□□□□ -1.84
CDK7P50613 RNU6-512P-201ENST00000364438 103 ntBASIC3.57□□□□□ -1.84
CDK7P50613 Y_RNA.402-201ENST00000383972 102 ntBASIC3.57□□□□□ -1.84
CDK7P50613 RNU6-483P-201ENST00000384088 108 ntBASIC3.57□□□□□ -1.84
CDK7P50613 U3.42-201ENST00000408746 214 ntBASIC3.57□□□□□ -1.84
CDK7P50613 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.57□□□□□ -1.84
CDK7P50613 AL591212.2-201ENST00000433923 257 ntBASIC3.57□□□□□ -1.84
CDK7P50613 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.57□□□□□ -1.84
CDK7P50613 DDX3P2-201ENST00000446138 111 ntBASIC3.57□□□□□ -1.84
CDK7P50613 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK7P50613 AC008264.1-201ENST00000447612 367 ntBASIC3.57□□□□□ -1.84
CDK7P50613 RPS4XP2-201ENST00000458402 793 ntBASIC3.57□□□□□ -1.84
CDK7P50613 AL121769.1-201ENST00000469473 401 ntBASIC3.57□□□□□ -1.84
CDK7P50613 AP002884.2-201ENST00000471647 395 ntBASIC3.57□□□□□ -1.84
CDK7P50613 KC877373.1-201ENST00000479066 408 ntBASIC3.57□□□□□ -1.84
CDK7P50613 ARL4AP2-201ENST00000507378 601 ntBASIC3.57□□□□□ -1.84
CDK7P50613 AL117351.2-201ENST00000513571 157 ntBASIC3.57□□□□□ -1.84
CDK7P50613 RNU6-1281P-201ENST00000516223 105 ntBASIC3.57□□□□□ -1.84
CDK7P50613 Y_RNA.693-201ENST00000516641 110 ntBASIC3.57□□□□□ -1.84
CDK7P50613 RNA5SP290-201ENST00000517133 127 ntBASIC3.57□□□□□ -1.84
CDK7P50613 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK7P50613 MTND1P35-201ENST00000526739 508 ntBASIC3.57□□□□□ -1.84
CDK7P50613 OR5AQ1P-201ENST00000527596 927 ntBASIC3.57□□□□□ -1.84
CDK7P50613 RANP3-201ENST00000530970 276 ntBASIC3.57□□□□□ -1.84
CDK7P50613 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.57□□□□□ -1.84
CDK7P50613 RPS3AP4-201ENST00000555161 764 ntBASIC3.57□□□□□ -1.84
CDK7P50613 AL365361.1-201ENST00000566942 3481 ntBASIC3.57□□□□□ -1.84
CDK7P50613 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK7P50613 UBL5P2-201ENST00000583788 219 ntBASIC3.57□□□□□ -1.84
CDK7P50613 AC013553.2-201ENST00000604244 589 ntBASIC3.57□□□□□ -1.84
CDK7P50613 AC007621.1-201ENST00000604544 437 ntBASIC3.57□□□□□ -1.84
CDK7P50613 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.57□□□□□ -1.84
CDK7P50613 AL365204.3-201ENST00000612448 685 ntBASIC3.57□□□□□ -1.84
CDK7P50613 AP001148.1-201ENST00000624124 2359 ntBASIC3.57□□□□□ -1.84
CDK7P50613 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CDK7P50613 AC116096.1-201ENST00000566804 2314 ntBASIC3.56□□□□□ -1.84
CDK7P50613 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDK7P50613 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDK7P50613 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CDK7P50613 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
CDK7P50613 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDK7P50613 AL021368.2-201ENST00000606125 5352 ntBASIC3.56□□□□□ -1.84
CDK7P50613 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.56□□□□□ -1.84
CDK7P50613 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.56□□□□□ -1.84
CDK7P50613 RPS4XP8-201ENST00000402039 771 ntBASIC3.56□□□□□ -1.84
CDK7P50613 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDK7P50613 MTCO1P20-201ENST00000425366 358 ntBASIC3.56□□□□□ -1.84
CDK7P50613 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.56□□□□□ -1.84
CDK7P50613 RPL36AP6-201ENST00000435770 321 ntBASIC3.56□□□□□ -1.84
CDK7P50613 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.56□□□□□ -1.84
CDK7P50613 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.56□□□□□ -1.84
CDK7P50613 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.56□□□□□ -1.84
CDK7P50613 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.56□□□□□ -1.84
CDK7P50613 AC019235.1-201ENST00000503847 207 ntBASIC3.56□□□□□ -1.84
CDK7P50613 AC011352.1-201ENST00000512300 793 ntBASIC3.56□□□□□ -1.84
CDK7P50613 RNU6-123P-201ENST00000516163 102 ntBASIC3.56□□□□□ -1.84
CDK7P50613 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.56□□□□□ -1.84
CDK7P50613 ATP5F1P5-201ENST00000526403 760 ntBASIC3.56□□□□□ -1.84
CDK7P50613 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.56□□□□□ -1.84
CDK7P50613 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.56□□□□□ -1.84
CDK7P50613 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.56□□□□□ -1.84
CDK7P50613 AC010653.1-201ENST00000571108 881 ntBASIC3.56□□□□□ -1.84
CDK7P50613 AC008752.3-201ENST00000588113 712 ntBASIC3.56□□□□□ -1.84
CDK7P50613 AC116312.1-201ENST00000606841 314 ntBASIC3.56□□□□□ -1.84
CDK7P50613 AC093788.1-201ENST00000609356 927 ntBASIC3.56□□□□□ -1.84
CDK7P50613 AC107294.1-201ENST00000609524 467 ntBASIC3.56□□□□□ -1.84
CDK7P50613 AL110115.1-201ENST00000614396 364 ntBASIC3.56□□□□□ -1.84
CDK7P50613 AC090132.2-201ENST00000615881 347 ntBASIC3.56□□□□□ -1.84
CDK7P50613 AC005609.4-201ENST00000625071 447 ntBASIC3.56□□□□□ -1.84
CDK7P50613 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.56□□□□□ -1.84
CDK7P50613 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
CDK7P50613 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDK7P50613 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.56□□□□□ -1.84
CDK7P50613 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDK7P50613 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDK7P50613 MTND5P17-201ENST00000418405 1603 ntBASIC3.55□□□□□ -1.84
CDK7P50613 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CDK7P50613 MTND4P14-201ENST00000435799 1354 ntBASIC3.55□□□□□ -1.84
CDK7P50613 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDK7P50613 MIR30E-201ENST00000362104 92 ntBASIC3.55□□□□□ -1.84
CDK7P50613 Y_RNA.245-201ENST00000364493 95 ntBASIC3.55□□□□□ -1.84
CDK7P50613 RNU6-116P-201ENST00000384042 109 ntBASIC3.55□□□□□ -1.84
CDK7P50613 RNU6-1029P-201ENST00000384109 107 ntBASIC3.55□□□□□ -1.84
CDK7P50613 Y_RNA.450-201ENST00000384198 113 ntBASIC3.55□□□□□ -1.84
CDK7P50613 Y_RNA.573-201ENST00000384763 105 ntBASIC3.55□□□□□ -1.84
CDK7P50613 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDK7P50613 RN7SKP220-201ENST00000410611 288 ntBASIC3.55□□□□□ -1.84
CDK7P50613 RN7SKP284-201ENST00000411002 343 ntBASIC3.55□□□□□ -1.84
CDK7P50613 RPS12P24-201ENST00000412619 387 ntBASIC3.55□□□□□ -1.84
CDK7P50613 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.55□□□□□ -1.84
CDK7P50613 AC092809.3-201ENST00000415453 231 ntBASIC3.55□□□□□ -1.84
CDK7P50613 ZNF90P2-204ENST00000419323 1075 ntBASIC3.55□□□□□ -1.84
CDK7P50613 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.55□□□□□ -1.84
CDK7P50613 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDK7P50613 MTCYBP5-201ENST00000423752 1135 ntBASIC3.55□□□□□ -1.84
CDK7P50613 UBE2D3P2-201ENST00000424409 445 ntBASIC3.55□□□□□ -1.84
CDK7P50613 USP9YP18-201ENST00000425912 695 ntBASIC3.55□□□□□ -1.84
CDK7P50613 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.55□□□□□ -1.84
CDK7P50613 NDUFB4P6-201ENST00000436819 366 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms