Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LHX1P48742 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
LHX1P48742 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.92□□□□□ -1.94
LHX1P48742 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
LHX1P48742 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
LHX1P48742 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
LHX1P48742 RNU6-288P-201ENST00000363690 104 ntBASIC2.92□□□□□ -1.94
LHX1P48742 RNU1-112P-201ENST00000364401 164 ntBASIC2.92□□□□□ -1.94
LHX1P48742 Y_RNA.359-201ENST00000365498 102 ntBASIC2.92□□□□□ -1.94
LHX1P48742 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
LHX1P48742 RNU6-946P-201ENST00000383878 107 ntBASIC2.92□□□□□ -1.94
LHX1P48742 AL031121.1-201ENST00000406553 254 ntBASIC2.92□□□□□ -1.94
LHX1P48742 RNA5SP184-201ENST00000411071 108 ntBASIC2.92□□□□□ -1.94
LHX1P48742 BTF3L4P1-201ENST00000413813 468 ntBASIC2.92□□□□□ -1.94
LHX1P48742 MTND3P17-201ENST00000416968 344 ntBASIC2.92□□□□□ -1.94
LHX1P48742 RPL7P46-201ENST00000425129 740 ntBASIC2.92□□□□□ -1.94
LHX1P48742 ELOCP14-201ENST00000428070 331 ntBASIC2.92□□□□□ -1.94
LHX1P48742 MED13P1-201ENST00000428342 171 ntBASIC2.92□□□□□ -1.94
LHX1P48742 GPM6BP2-201ENST00000432046 144 ntBASIC2.92□□□□□ -1.94
LHX1P48742 AL353706.1-201ENST00000436728 494 ntBASIC2.92□□□□□ -1.94
LHX1P48742 ELOCP7-201ENST00000439968 331 ntBASIC2.92□□□□□ -1.94
LHX1P48742 GPM6BP1-201ENST00000446387 144 ntBASIC2.92□□□□□ -1.94
LHX1P48742 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.92□□□□□ -1.94
LHX1P48742 RPL12P25-201ENST00000455592 494 ntBASIC2.92□□□□□ -1.94
LHX1P48742 AC003982.1-202ENST00000469928 248 ntBASIC2.92□□□□□ -1.94
LHX1P48742 AC007182.2-201ENST00000489251 402 ntBASIC2.92□□□□□ -1.94
LHX1P48742 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.92□□□□□ -1.94
LHX1P48742 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.92□□□□□ -1.94
LHX1P48742 SNORA9.3-201ENST00000516383 129 ntBASIC2.92□□□□□ -1.94
LHX1P48742 RNU6-677P-201ENST00000516914 101 ntBASIC2.92□□□□□ -1.94
LHX1P48742 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.92□□□□□ -1.94
LHX1P48742 AL136363.1-201ENST00000605349 337 ntBASIC2.92□□□□□ -1.94
LHX1P48742 AC098614.4-201ENST00000607601 462 ntBASIC2.92□□□□□ -1.94
LHX1P48742 AL365204.3-201ENST00000612448 685 ntBASIC2.92□□□□□ -1.94
LHX1P48742 AC093783.1-201ENST00000612976 329 ntBASIC2.92□□□□□ -1.94
LHX1P48742 AC008498.1-201ENST00000613012 531 ntBASIC2.92□□□□□ -1.94
LHX1P48742 AC009509.4-201ENST00000619202 509 ntBASIC2.92□□□□□ -1.94
LHX1P48742 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.92□□□□□ -1.94
LHX1P48742 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.92□□□□□ -1.94
LHX1P48742 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.92□□□□□ -1.94
LHX1P48742 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LHX1P48742 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.92□□□□□ -1.94
LHX1P48742 API5P2-201ENST00000397055 1498 ntBASIC2.91□□□□□ -1.94
LHX1P48742 RNU6-169P-201ENST00000365336 107 ntBASIC2.91□□□□□ -1.94
LHX1P48742 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LHX1P48742 MIR181A2-201ENST00000384863 110 ntBASIC2.91□□□□□ -1.94
LHX1P48742 MIR558-201ENST00000384920 94 ntBASIC2.91□□□□□ -1.94
LHX1P48742 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.91□□□□□ -1.94
LHX1P48742 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.91□□□□□ -1.94
LHX1P48742 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.91□□□□□ -1.94
LHX1P48742 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.91□□□□□ -1.94
LHX1P48742 SNRPEP9-201ENST00000436794 238 ntBASIC2.91□□□□□ -1.94
LHX1P48742 RPS29P6-201ENST00000438196 145 ntBASIC2.91□□□□□ -1.94
LHX1P48742 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.91□□□□□ -1.94
LHX1P48742 CECR9-201ENST00000453421 199 ntBASIC2.91□□□□□ -1.94
LHX1P48742 AC092798.1-201ENST00000458542 409 ntBASIC2.91□□□□□ -1.94
LHX1P48742 SNORD109B-201ENST00000458961 67 ntBASIC2.91□□□□□ -1.94
LHX1P48742 SNORD109A-201ENST00000459128 67 ntBASIC2.91□□□□□ -1.94
LHX1P48742 RPL21P8-201ENST00000465083 535 ntBASIC2.91□□□□□ -1.94
LHX1P48742 AC104472.2-201ENST00000469035 601 ntBASIC2.91□□□□□ -1.94
LHX1P48742 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.91□□□□□ -1.94
LHX1P48742 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.91□□□□□ -1.94
LHX1P48742 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.91□□□□□ -1.94
LHX1P48742 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.91□□□□□ -1.94
LHX1P48742 MTCO3P24-201ENST00000572729 782 ntBASIC2.91□□□□□ -1.94
LHX1P48742 MIR4319-201ENST00000577285 85 ntBASIC2.91□□□□□ -1.94
LHX1P48742 AL035413.2-201ENST00000604801 525 ntBASIC2.91□□□□□ -1.94
LHX1P48742 AC004805.2-201ENST00000605382 482 ntBASIC2.91□□□□□ -1.94
LHX1P48742 AC245008.1-201ENST00000608123 476 ntBASIC2.91□□□□□ -1.94
LHX1P48742 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LHX1P48742 AL161629.2-201ENST00000615347 275 ntBASIC2.91□□□□□ -1.94
LHX1P48742 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.91□□□□□ -1.94
LHX1P48742 AP003122.6-201ENST00000623831 495 ntBASIC2.91□□□□□ -1.94
LHX1P48742 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.91□□□□□ -1.94
LHX1P48742 MTND5P42-201ENST00000637720 498 ntBASIC2.91□□□□□ -1.94
LHX1P48742 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LHX1P48742 AC010680.1-201ENST00000590024 3590 ntBASIC2.91□□□□□ -1.94
LHX1P48742 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.91□□□□□ -1.94
LHX1P48742 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
LHX1P48742 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
LHX1P48742 AC062016.1-201ENST00000355719 319 ntBASIC2.9□□□□□ -1.95
LHX1P48742 RNU6-641P-201ENST00000384006 107 ntBASIC2.9□□□□□ -1.95
LHX1P48742 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
LHX1P48742 RNU2-39P-201ENST00000410604 198 ntBASIC2.9□□□□□ -1.95
LHX1P48742 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.9□□□□□ -1.95
LHX1P48742 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.9□□□□□ -1.95
LHX1P48742 PIGFP2-201ENST00000421400 651 ntBASIC2.9□□□□□ -1.95
LHX1P48742 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.9□□□□□ -1.95
LHX1P48742 MTCO2P18-201ENST00000457151 658 ntBASIC2.9□□□□□ -1.95
LHX1P48742 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.9□□□□□ -1.95
LHX1P48742 AC093899.1-201ENST00000457984 376 ntBASIC2.9□□□□□ -1.95
LHX1P48742 AC233702.1-201ENST00000482905 502 ntBASIC2.9□□□□□ -1.95
LHX1P48742 RPL39P36-201ENST00000490784 156 ntBASIC2.9□□□□□ -1.95
LHX1P48742 ARL4AP2-201ENST00000507378 601 ntBASIC2.9□□□□□ -1.95
LHX1P48742 MTCO3P28-201ENST00000513351 515 ntBASIC2.9□□□□□ -1.95
LHX1P48742 RN7SKP298-201ENST00000515950 94 ntBASIC2.9□□□□□ -1.95
LHX1P48742 SCARNA24.1-201ENST00000516465 137 ntBASIC2.9□□□□□ -1.95
LHX1P48742 RNU6-430P-201ENST00000517078 107 ntBASIC2.9□□□□□ -1.95
LHX1P48742 SNORA31.21-201ENST00000517180 77 ntBASIC2.9□□□□□ -1.95
LHX1P48742 AP002963.1-201ENST00000530590 184 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms