Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 HMGN2P7-201ENST00000456186 273 ntBASIC3.57□□□□□ -1.84
MMP13P45452 RNU7-182P-201ENST00000459009 62 ntBASIC3.57□□□□□ -1.84
MMP13P45452 AC012181.1-201ENST00000479895 423 ntBASIC3.57□□□□□ -1.84
MMP13P45452 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MMP13P45452 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MMP13P45452 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.57□□□□□ -1.84
MMP13P45452 NDUFB4P9-201ENST00000511646 388 ntBASIC3.57□□□□□ -1.84
MMP13P45452 PHBP14-201ENST00000512887 367 ntBASIC3.57□□□□□ -1.84
MMP13P45452 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.57□□□□□ -1.84
MMP13P45452 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.57□□□□□ -1.84
MMP13P45452 RNU6-559P-201ENST00000516151 98 ntBASIC3.57□□□□□ -1.84
MMP13P45452 RNU6-864P-201ENST00000516256 108 ntBASIC3.57□□□□□ -1.84
MMP13P45452 RNU6-64P-201ENST00000517119 105 ntBASIC3.57□□□□□ -1.84
MMP13P45452 COPS8P3-201ENST00000526024 482 ntBASIC3.57□□□□□ -1.84
MMP13P45452 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.57□□□□□ -1.84
MMP13P45452 AC010733.2-201ENST00000589496 5702 ntBASIC3.57□□□□□ -1.84
MMP13P45452 AP001350.1-201ENST00000601906 1524 ntBASIC3.57□□□□□ -1.84
MMP13P45452 APOOP1-201ENST00000604695 592 ntBASIC3.57□□□□□ -1.84
MMP13P45452 AP000942.4-201ENST00000604811 241 ntBASIC3.57□□□□□ -1.84
MMP13P45452 AC245389.1-201ENST00000605141 529 ntBASIC3.57□□□□□ -1.84
MMP13P45452 AC092807.2-201ENST00000609367 243 ntBASIC3.57□□□□□ -1.84
MMP13P45452 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MMP13P45452 uc_338.15-201ENST00000615470 191 ntBASIC3.57□□□□□ -1.84
MMP13P45452 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.57□□□□□ -1.84
MMP13P45452 AC090971.5-201ENST00000621102 293 ntBASIC3.57□□□□□ -1.84
MMP13P45452 AC048347.1-201ENST00000624621 427 ntBASIC3.57□□□□□ -1.84
MMP13P45452 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MMP13P45452 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.57□□□□□ -1.84
MMP13P45452 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
MMP13P45452 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MMP13P45452 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.56□□□□□ -1.84
MMP13P45452 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MMP13P45452 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
MMP13P45452 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
MMP13P45452 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
MMP13P45452 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
MMP13P45452 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
MMP13P45452 RNU6-600P-201ENST00000362524 99 ntBASIC3.56□□□□□ -1.84
MMP13P45452 RNU6-1252P-201ENST00000363054 104 ntBASIC3.56□□□□□ -1.84
MMP13P45452 Y_RNA.128-201ENST00000363391 112 ntBASIC3.56□□□□□ -1.84
MMP13P45452 RNU6-263P-201ENST00000363811 107 ntBASIC3.56□□□□□ -1.84
MMP13P45452 SNORA4.3-201ENST00000365564 137 ntBASIC3.56□□□□□ -1.84
MMP13P45452 RNU6-641P-201ENST00000384006 107 ntBASIC3.56□□□□□ -1.84
MMP13P45452 MIR200C-201ENST00000384980 68 ntBASIC3.56□□□□□ -1.84
MMP13P45452 AL606923.1-201ENST00000406616 190 ntBASIC3.56□□□□□ -1.84
MMP13P45452 RNU2-39P-201ENST00000410604 198 ntBASIC3.56□□□□□ -1.84
MMP13P45452 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.56□□□□□ -1.84
MMP13P45452 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.56□□□□□ -1.84
MMP13P45452 AC091286.1-201ENST00000431233 461 ntBASIC3.56□□□□□ -1.84
MMP13P45452 AC073063.1-201ENST00000434352 607 ntBASIC3.56□□□□□ -1.84
MMP13P45452 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.56□□□□□ -1.84
MMP13P45452 SNORA84-201ENST00000459229 133 ntBASIC3.56□□□□□ -1.84
MMP13P45452 RPS15AP36-201ENST00000492022 382 ntBASIC3.56□□□□□ -1.84
MMP13P45452 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.56□□□□□ -1.84
MMP13P45452 RPL7P47-201ENST00000497299 556 ntBASIC3.56□□□□□ -1.84
MMP13P45452 RPL23AP55-201ENST00000498163 452 ntBASIC3.56□□□□□ -1.84
MMP13P45452 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.56□□□□□ -1.84
MMP13P45452 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.56□□□□□ -1.84
MMP13P45452 Y_RNA.682-201ENST00000516457 100 ntBASIC3.56□□□□□ -1.84
MMP13P45452 RNU6-1046P-201ENST00000516538 107 ntBASIC3.56□□□□□ -1.84
MMP13P45452 SNORA64.4-201ENST00000516632 81 ntBASIC3.56□□□□□ -1.84
MMP13P45452 RNU6-273P-201ENST00000516937 96 ntBASIC3.56□□□□□ -1.84
MMP13P45452 Y_RNA.711-201ENST00000516993 102 ntBASIC3.56□□□□□ -1.84
MMP13P45452 SNORA25.17-201ENST00000517184 124 ntBASIC3.56□□□□□ -1.84
MMP13P45452 IGKV2D-19-201ENST00000523346 262 ntBASIC3.56□□□□□ -1.84
MMP13P45452 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.56□□□□□ -1.84
MMP13P45452 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.56□□□□□ -1.84
MMP13P45452 AL163153.1-201ENST00000554223 283 ntBASIC3.56□□□□□ -1.84
MMP13P45452 DNAJC8P1-201ENST00000554535 372 ntBASIC3.56□□□□□ -1.84
MMP13P45452 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.56□□□□□ -1.84
MMP13P45452 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.56□□□□□ -1.84
MMP13P45452 AC007151.1-201ENST00000572774 483 ntBASIC3.56□□□□□ -1.84
MMP13P45452 MIR3158-1-201ENST00000583596 81 ntBASIC3.56□□□□□ -1.84
MMP13P45452 AL080274.1-201ENST00000605565 220 ntBASIC3.56□□□□□ -1.84
MMP13P45452 AL121655.1-201ENST00000605811 308 ntBASIC3.56□□□□□ -1.84
MMP13P45452 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.56□□□□□ -1.84
MMP13P45452 AC006133.1-201ENST00000617106 264 ntBASIC3.56□□□□□ -1.84
MMP13P45452 AC244100.1-202ENST00000621554 382 ntBASIC3.56□□□□□ -1.84
MMP13P45452 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.56□□□□□ -1.84
MMP13P45452 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.56□□□□□ -1.84
MMP13P45452 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
MMP13P45452 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MMP13P45452 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.55□□□□□ -1.84
MMP13P45452 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
MMP13P45452 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
MMP13P45452 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
MMP13P45452 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
MMP13P45452 MTND4P27-201ENST00000450813 1354 ntBASIC3.55□□□□□ -1.84
MMP13P45452 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
MMP13P45452 RNA5SP383-201ENST00000362934 120 ntBASIC3.55□□□□□ -1.84
MMP13P45452 RNU6-61P-201ENST00000365528 109 ntBASIC3.55□□□□□ -1.84
MMP13P45452 RNU5E-6P-201ENST00000365574 115 ntBASIC3.55□□□□□ -1.84
MMP13P45452 Y_RNA.414-201ENST00000384011 101 ntBASIC3.55□□□□□ -1.84
MMP13P45452 RNU6-1181P-201ENST00000384191 106 ntBASIC3.55□□□□□ -1.84
MMP13P45452 SNORA24.1-201ENST00000384401 135 ntBASIC3.55□□□□□ -1.84
MMP13P45452 RNU6-1160P-201ENST00000384546 104 ntBASIC3.55□□□□□ -1.84
MMP13P45452 MIR218-2-201ENST00000385006 110 ntBASIC3.55□□□□□ -1.84
MMP13P45452 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
MMP13P45452 AL583834.1-201ENST00000406943 343 ntBASIC3.55□□□□□ -1.84
MMP13P45452 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms