Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC005410.1-202ENST00000460347 485 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 AC025033.1-201ENST00000463883 194 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.13□□□□□ -2.07
TNFSF9P41273 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.13□□□□□ -2.07
TNFSF9P41273 RBM43P1-201ENST00000476891 1081 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.13□□□□□ -2.07
TNFSF9P41273 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.13□□□□□ -2.07
TNFSF9P41273 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.13□□□□□ -2.07
TNFSF9P41273 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.13□□□□□ -2.07
TNFSF9P41273 MTCYBP23-201ENST00000558717 1102 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 AL049838.1-201ENST00000563647 981 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 AC007151.1-201ENST00000572774 483 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 RPS3AP23-202ENST00000574601 686 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 AC024619.4-201ENST00000580924 316 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.13□□□□□ -2.07
TNFSF9P41273 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TNFSF9P41273 AC092881.1-201ENST00000638218 2733 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 AC110491.1-201ENST00000562191 2010 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 AC010329.5-201ENST00000623497 2174 ntBASIC2.13□□□□□ -2.07
TNFSF9P41273 AP006437.1-201ENST00000641440 3685 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TNFSF9P41273 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TNFSF9P41273 RNU6-621P-201ENST00000364752 109 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 RNU1-52P-201ENST00000384190 164 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 ERHP2-201ENST00000402323 299 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.12□□□□□ -2.07
TNFSF9P41273 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.12□□□□□ -2.07
TNFSF9P41273 RPS3AP37-201ENST00000419176 745 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 ELOCP14-201ENST00000428070 331 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.12□□□□□ -2.07
TNFSF9P41273 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.12□□□□□ -2.07
TNFSF9P41273 ELOCP7-201ENST00000439968 331 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 MTATP6P30-201ENST00000443540 664 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 FABP5P13-201ENST00000452144 328 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 AL139109.1-201ENST00000455491 297 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 snoU109.3-201ENST00000459477 145 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
TNFSF9P41273 AC010631.1-201ENST00000474150 156 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.12□□□□□ -2.07
TNFSF9P41273 AC119751.4-201ENST00000507498 357 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 RNU6-548P-201ENST00000517083 115 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 NACAP3-201ENST00000552100 481 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 MIR4446-201ENST00000578505 67 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 UBE2L4-201ENST00000587688 464 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 AC002984.1-201ENST00000591692 448 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 DPPA3P3-201ENST00000603842 430 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 AC007349.4-201ENST00000608114 532 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 AL353997.5-201ENST00000618886 171 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 AL158801.5-201ENST00000623123 465 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 PCMTD1P7-201ENST00000634506 357 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TNFSF9P41273 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
TNFSF9P41273 AC002543.1-201ENST00000299783 1954 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.12□□□□□ -2.07
TNFSF9P41273 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TNFSF9P41273 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.11□□□□□ -2.07
TNFSF9P41273 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TNFSF9P41273 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TNFSF9P41273 Y_RNA.192-201ENST00000363977 102 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 ANAPC10P1-201ENST00000395991 556 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 RNU2-20P-201ENST00000410425 191 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 NDUFS5P4-201ENST00000412983 318 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 SKA2P1-201ENST00000425592 390 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TNFSF9P41273 WARS2P1-201ENST00000429678 537 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 MTND1P28-201ENST00000435623 950 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 AC003989.2-201ENST00000440224 169 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 EEF1A1P39-201ENST00000440791 250 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.11□□□□□ -2.07
TNFSF9P41273 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.11□□□□□ -2.07
TNFSF9P41273 HMGN2P23-201ENST00000456759 269 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 AC013267.1-201ENST00000458227 267 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 AC091951.3-201ENST00000504093 246 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 HSPE1P23-201ENST00000509838 286 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 AC116353.3-201ENST00000511215 249 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.11□□□□□ -2.07
TNFSF9P41273 RNU6-927P-201ENST00000516199 100 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 SNORA31.6-201ENST00000516241 130 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 RNU6-415P-201ENST00000516252 97 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 RNA5SP165-201ENST00000517142 115 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.11□□□□□ -2.07
TNFSF9P41273 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.11□□□□□ -2.07
TNFSF9P41273 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.11□□□□□ -2.07
TNFSF9P41273 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TNFSF9P41273 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.11□□□□□ -2.07
TNFSF9P41273 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TNFSF9P41273 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.11□□□□□ -2.07
TNFSF9P41273 AC009712.1-201ENST00000564938 316 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 AC245884.10-201ENST00000597355 337 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 AC025588.2-201ENST00000604851 466 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 AC106052.1-201ENST00000608029 497 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 AL589743.7-201ENST00000612637 233 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 AC006386.1-201ENST00000619436 415 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 AP002791.1-201ENST00000623291 381 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 AC244517.12-201ENST00000623581 663 ntBASIC2.11□□□□□ -2.07
TNFSF9P41273 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.11□□□□□ -2.07
TNFSF9P41273 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms