Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXD12P35452 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXD12P35452 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXD12P35452 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXD12P35452 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXD12P35452 HSPE1P7-201ENST00000604681 321 ntBASIC3.62□□□□□ -1.83
HOXD12P35452 BNIP3P10-201ENST00000605360 577 ntBASIC3.62□□□□□ -1.83
HOXD12P35452 YPEL5P2-201ENST00000605553 359 ntBASIC3.62□□□□□ -1.83
HOXD12P35452 AL589994.2-201ENST00000621124 579 ntBASIC3.62□□□□□ -1.83
HOXD12P35452 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXD12P35452 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXD12P35452 U6.114-201ENST00000636407 96 ntBASIC3.62□□□□□ -1.83
HOXD12P35452 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXD12P35452 AC093908.1-201ENST00000623125 8092 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXD12P35452 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXD12P35452 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXD12P35452 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXD12P35452 SNORA24.1-201ENST00000384401 135 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 SNORD37.1-201ENST00000390968 65 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 SAR1AP2-201ENST00000392696 594 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 AL136116.1-201ENST00000403591 381 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 RAP1BP3-201ENST00000407180 549 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 RNA5SP118-201ENST00000410385 109 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 RPL21P111-201ENST00000418453 477 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 RPL36AP6-201ENST00000435770 321 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 MTND1P18-201ENST00000448191 573 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 AC008155.2-201ENST00000464337 397 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 MTCYBP18-201ENST00000501056 747 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 RNU6-507P-201ENST00000516045 100 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 CASP1P1-201ENST00000526345 212 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 CENPUP1-201ENST00000526649 1202 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXD12P35452 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXD12P35452 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXD12P35452 AL355836.1-201ENST00000555951 870 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXD12P35452 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXD12P35452 AC015917.1-201ENST00000579654 510 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 AC024619.4-201ENST00000580924 316 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 BNIP3P9-201ENST00000603714 553 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 AC006077.1-201ENST00000604746 343 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 AC025253.1-201ENST00000613623 543 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 AC130324.3-201ENST00000614165 542 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 AC010133.1-201ENST00000615809 842 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 AC025034.2-201ENST00000623264 286 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 SCARNA15.3-201ENST00000626315 122 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 SCARNA4.1-201ENST00000628597 123 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXD12P35452 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXD12P35452 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXD12P35452 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXD12P35452 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXD12P35452 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXD12P35452 OR4G2P-202ENST00000641004 1759 ntBASIC3.61□□□□□ -1.83
HOXD12P35452 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXD12P35452 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HOXD12P35452 AL035425.3-201ENST00000564206 4996 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HOXD12P35452 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HOXD12P35452 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXD12P35452 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXD12P35452 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HOXD12P35452 Y_RNA.86-201ENST00000363020 111 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 SMIM11P1-201ENST00000369586 178 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 RNU6-1029P-201ENST00000384109 107 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HOXD12P35452 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HOXD12P35452 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXD12P35452 NDUFS5P1-201ENST00000405668 289 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 RNU6-373P-201ENST00000411247 98 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXD12P35452 AL121601.2-201ENST00000438019 707 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXD12P35452 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXD12P35452 AL031183.1-201ENST00000457667 207 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 RPL21P10-201ENST00000463521 490 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 EIF4EP3-201ENST00000498782 656 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 AC092436.1-201ENST00000506450 503 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HOXD12P35452 AC114786.4-201ENST00000508771 728 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 RN7SKP219-201ENST00000516825 296 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 RNA5SP503-201ENST00000517047 117 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXD12P35452 SUB1P1-201ENST00000524415 382 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXD12P35452 DNAJC8P1-201ENST00000554535 372 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.6□□□□□ -1.83
HOXD12P35452 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXD12P35452 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.6□□□□□ -1.83
HOXD12P35452 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXD12P35452 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXD12P35452 AC010525.2-201ENST00000590920 195 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 AL133393.1-201ENST00000603277 287 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 LARP7P1-201ENST00000605576 316 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 SDR42E1P2-201ENST00000614861 481 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 MIR8057-201ENST00000620957 69 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 AC006504.8-201ENST00000621046 635 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 AC079684.1-201ENST00000621405 437 ntBASIC3.6□□□□□ -1.83
HOXD12P35452 AC010338.1-201ENST00000621823 717 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms