Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.29□□□□□ -2.04
SHMT2P34897 AC116347.2-201ENST00000514912 523 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.29□□□□□ -2.04
SHMT2P34897 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.29□□□□□ -2.04
SHMT2P34897 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SHMT2P34897 AC087241.2-201ENST00000535801 324 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 AC123904.2-201ENST00000548059 300 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.29□□□□□ -2.04
SHMT2P34897 AC091489.2-201ENST00000566263 604 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 AC105137.2-201ENST00000569073 466 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.29□□□□□ -2.04
SHMT2P34897 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.29□□□□□ -2.04
SHMT2P34897 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.29□□□□□ -2.04
SHMT2P34897 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.29□□□□□ -2.04
SHMT2P34897 AC098826.3-201ENST00000603823 466 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 AL161798.1-201ENST00000604630 131 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 AC004223.4-201ENST00000612426 332 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 AC008498.1-201ENST00000613012 531 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 AC009159.1-201ENST00000618386 642 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 UCA1.1-201ENST00000620952 75 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.29□□□□□ -2.04
SHMT2P34897 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.29□□□□□ -2.04
SHMT2P34897 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.29□□□□□ -2.04
SHMT2P34897 U2.21-201ENST00000637295 81 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.29□□□□□ -2.04
SHMT2P34897 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.29□□□□□ -2.04
SHMT2P34897 ZNF720P1-201ENST00000562403 1939 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
SHMT2P34897 CR848007.1-201ENST00000442354 1699 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SHMT2P34897 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SHMT2P34897 RNU5F-6P-201ENST00000362979 116 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 NDUFS5P1-201ENST00000405668 289 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 RNU6-193P-201ENST00000410977 107 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 USP9YP13-201ENST00000417797 480 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 ZNF90P2-204ENST00000419323 1075 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 AC098614.2-201ENST00000426040 255 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.28□□□□□ -2.04
SHMT2P34897 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.28□□□□□ -2.04
SHMT2P34897 RPL37P21-201ENST00000435890 276 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.28□□□□□ -2.04
SHMT2P34897 AC118469.1-201ENST00000442943 488 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 HIGD1AP2-201ENST00000446367 280 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.28□□□□□ -2.04
SHMT2P34897 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
SHMT2P34897 AC068587.2-201ENST00000478386 781 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 RPF2P2-201ENST00000504693 896 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.28□□□□□ -2.04
SHMT2P34897 MRPS36P2-201ENST00000512569 299 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.28□□□□□ -2.04
SHMT2P34897 RNU6-201P-201ENST00000517100 61 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 OR4R1P-201ENST00000529879 463 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.28□□□□□ -2.04
SHMT2P34897 AL512310.1-201ENST00000548639 172 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 AC121758.2-201ENST00000553271 193 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 ZNF519P3-201ENST00000557158 1032 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 MTATP6P24-201ENST00000576835 677 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.28□□□□□ -2.04
SHMT2P34897 MIR3146-201ENST00000580367 79 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.28□□□□□ -2.04
SHMT2P34897 AL353778.1-201ENST00000603149 408 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 AC004805.2-201ENST00000605382 482 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 AC046143.2-201ENST00000609789 160 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SHMT2P34897 AC090970.3-201ENST00000612566 866 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 AC011890.2-201ENST00000613393 294 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 uc_338.12-201ENST00000616344 181 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 AC104010.1-201ENST00000616889 150 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.28□□□□□ -2.04
SHMT2P34897 AC131159.1-201ENST00000621854 213 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.28□□□□□ -2.04
SHMT2P34897 MTND5P29-201ENST00000458676 1807 ntBASIC2.28□□□□□ -2.04
SHMT2P34897 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SHMT2P34897 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.28□□□□□ -2.05
SHMT2P34897 PABPC1P9-201ENST00000426076 1612 ntBASIC2.28□□□□□ -2.05
SHMT2P34897 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SHMT2P34897 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
SHMT2P34897 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.27□□□□□ -2.05
SHMT2P34897 RNA5SP289-201ENST00000362332 137 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 RNU6-501P-201ENST00000364072 100 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 XGY1-201ENST00000381172 446 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 RNU6-278P-201ENST00000390945 109 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 RPS4XP7-201ENST00000406274 780 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 RNU4-53P-201ENST00000410828 140 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 AC023141.4-201ENST00000412031 328 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.27□□□□□ -2.05
SHMT2P34897 SKA2P1-201ENST00000425592 390 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.27□□□□□ -2.05
SHMT2P34897 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.27□□□□□ -2.05
SHMT2P34897 AC009296.1-201ENST00000443146 155 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.27□□□□□ -2.05
SHMT2P34897 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.27□□□□□ -2.05
SHMT2P34897 CECR9-201ENST00000453421 199 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 FABP5P15-201ENST00000453566 214 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 AC107626.1-201ENST00000471084 183 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 RPL31P41-201ENST00000477967 372 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.27□□□□□ -2.05
SHMT2P34897 RPS27AP10-201ENST00000496103 208 ntBASIC2.27□□□□□ -2.05
SHMT2P34897 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms