Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU1-39P-201ENST00000383897 165 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 RNU6-278P-201ENST00000390945 109 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXC13P31276 BX682237.1-201ENST00000415016 335 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.21□□□□□ -1.9
HOXC13P31276 AL109913.1-201ENST00000421173 514 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AC010975.2-201ENST00000427781 588 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC13P31276 MTND1P30-201ENST00000441241 901 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 RPL23AP20-201ENST00000447965 421 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 MTND5P20-201ENST00000448677 143 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 FGF7P6-202ENST00000451282 293 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXC13P31276 HMGN1P10-201ENST00000474557 553 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AC114967.1-201ENST00000504890 259 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AC074344.1-201ENST00000512823 224 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AC091826.1-201ENST00000514065 313 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 RNU6-390P-201ENST00000516259 103 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AP005639.2-201ENST00000527592 928 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AP002404.1-201ENST00000532005 451 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AP000857.1-201ENST00000532151 543 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC13P31276 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.21□□□□□ -1.9
HOXC13P31276 AC005951.2-201ENST00000576282 495 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.21□□□□□ -1.9
HOXC13P31276 AC005034.5-201ENST00000604219 466 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 BCRP9-201ENST00000605312 388 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AC107214.2-201ENST00000608204 634 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AC006566.1-201ENST00000608943 513 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AL591516.1-201ENST00000611326 274 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AC090517.2-201ENST00000614966 680 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 Y_RNA.804-201ENST00000615262 101 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 AL359697.1-201ENST00000624879 587 ntBASIC3.21□□□□□ -1.9
HOXC13P31276 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HOXC13P31276 CCT4P2-201ENST00000233836 1548 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HOXC13P31276 AC073325.2-201ENST00000339545 159 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 Y_RNA.554-201ENST00000384672 102 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 OR51A5P-201ENST00000415429 942 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.2□□□□□ -1.9
HOXC13P31276 AC092047.1-201ENST00000424997 240 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 MED14P1-201ENST00000430517 648 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 USP12PX-201ENST00000432383 1057 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AC009969.1-201ENST00000438726 172 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 MTCO3P45-201ENST00000443036 613 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 RPL37P4-201ENST00000448908 268 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.2□□□□□ -1.9
HOXC13P31276 OR6C5P-201ENST00000452388 923 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 SNRPGP9-201ENST00000456025 225 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 RNU7-59P-201ENST00000459101 61 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 RPS20P22-201ENST00000473700 357 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 RPL31P41-201ENST00000477967 372 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AL135752.1-201ENST00000479477 471 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 RPPH1-2P-201ENST00000516688 293 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 Y_RNA.702-201ENST00000516843 96 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AC104383.1-201ENST00000530297 370 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC13P31276 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC13P31276 GLYCAM1-201ENST00000546596 285 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AC007954.1-201ENST00000554198 494 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.2□□□□□ -1.9
HOXC13P31276 GTF3AP2-201ENST00000557014 266 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AL133153.1-201ENST00000557756 303 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC13P31276 TPRKBP2-201ENST00000565969 475 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC13P31276 AC103810.1-201ENST00000579873 453 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 MIR4506-201ENST00000584693 77 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AL355877.2-201ENST00000603670 358 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AC018714.1-201ENST00000605028 208 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AC008945.2-201ENST00000606056 604 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AC007014.2-201ENST00000615581 479 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AL157786.1-207ENST00000627771 695 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC13P31276 AC099654.14-201ENST00000638599 341 ntBASIC3.2□□□□□ -1.9
HOXC13P31276 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC13P31276 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HOXC13P31276 AL354685.2-201ENST00000448218 1447 ntBASIC3.19□□□□□ -1.9
HOXC13P31276 AC006378.2-201ENST00000623178 2476 ntBASIC3.19□□□□□ -1.9
HOXC13P31276 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXC13P31276 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
HOXC13P31276 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HOXC13P31276 Y_RNA.61-201ENST00000362835 102 ntBASIC3.19□□□□□ -1.9
HOXC13P31276 SNORA72.1-201ENST00000363485 129 ntBASIC3.19□□□□□ -1.9
HOXC13P31276 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXC13P31276 RNU6-1042P-201ENST00000384204 107 ntBASIC3.19□□□□□ -1.9
HOXC13P31276 SNORD15B-201ENST00000384714 146 ntBASIC3.19□□□□□ -1.9
HOXC13P31276 MIR19A-201ENST00000384878 82 ntBASIC3.19□□□□□ -1.9
HOXC13P31276 SNORD67-201ENST00000390833 111 ntBASIC3.19□□□□□ -1.9
HOXC13P31276 RN7SKP284-201ENST00000411002 343 ntBASIC3.19□□□□□ -1.9
HOXC13P31276 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXC13P31276 USP9YP6-201ENST00000413550 854 ntBASIC3.19□□□□□ -1.9
HOXC13P31276 RPL32P35-201ENST00000415214 394 ntBASIC3.19□□□□□ -1.9
HOXC13P31276 RPL23AP39-201ENST00000415533 405 ntBASIC3.19□□□□□ -1.9
HOXC13P31276 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXC13P31276 AL139132.1-201ENST00000431587 344 ntBASIC3.19□□□□□ -1.9
HOXC13P31276 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXC13P31276 AC016696.1-201ENST00000446949 318 ntBASIC3.19□□□□□ -1.9
HOXC13P31276 ST13P20-201ENST00000447996 1065 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms