Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 RNU6-1322P-201ENST00000364309 107 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
ABCD3P28288 RNU6-116P-201ENST00000384042 109 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 RNU6-517P-201ENST00000384362 110 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 MIR490-201ENST00000384865 128 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 RNA5SP171-201ENST00000391071 115 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ABCD3P28288 EEF1A1P40-201ENST00000412883 573 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 AC096649.2-201ENST00000416186 393 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.17□□□□□ -1.9
ABCD3P28288 MTCO3P30-201ENST00000426425 670 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 AC005300.1-201ENST00000428401 373 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.17□□□□□ -1.9
ABCD3P28288 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.17□□□□□ -1.9
ABCD3P28288 RPL21P41-201ENST00000459863 264 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 SRRM1P2-201ENST00000464531 1192 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 FCF1P3-201ENST00000496394 590 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 RNU6-506P-201ENST00000516553 94 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 SNORA70.19-201ENST00000516717 90 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 RNU6-1183P-201ENST00000517054 60 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.17□□□□□ -1.9
ABCD3P28288 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.17□□□□□ -1.9
ABCD3P28288 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.17□□□□□ -1.9
ABCD3P28288 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.17□□□□□ -1.9
ABCD3P28288 AC010653.1-201ENST00000571108 881 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 AC006557.5-201ENST00000603126 811 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 AC019176.2-201ENST00000611579 315 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 AL355365.1-201ENST00000616480 294 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 U6.42-201ENST00000618440 107 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 MIR3199-2-201ENST00000636243 86 ntBASIC3.17□□□□□ -1.9
ABCD3P28288 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
ABCD3P28288 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ABCD3P28288 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.17□□□□□ -1.9
ABCD3P28288 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.17□□□□□ -1.9
ABCD3P28288 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.16□□□□□ -1.9
ABCD3P28288 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.16□□□□□ -1.9
ABCD3P28288 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
ABCD3P28288 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ABCD3P28288 MTCO1P12-201ENST00000414273 1543 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
ABCD3P28288 OR4G2P-201ENST00000328113 903 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 RNU6-1085P-201ENST00000363576 107 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 MIR7-3-201ENST00000384898 110 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 MIR183-201ENST00000384958 110 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ABCD3P28288 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 AL031779.1-201ENST00000415663 330 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.16□□□□□ -1.9
ABCD3P28288 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.16□□□□□ -1.9
ABCD3P28288 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.16□□□□□ -1.9
ABCD3P28288 AL353193.1-201ENST00000421444 268 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 AL645937.1-202ENST00000421799 937 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 AC007560.1-201ENST00000426912 237 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 YME1L1P1-201ENST00000429435 297 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 GTF2IP20-201ENST00000431663 360 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 AL159987.2-201ENST00000432754 307 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.16□□□□□ -1.9
ABCD3P28288 AL358232.1-201ENST00000448030 501 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 MRPS31P2-201ENST00000451581 518 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 CYCSP35-201ENST00000451978 304 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.16□□□□□ -1.9
ABCD3P28288 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.16□□□□□ -1.9
ABCD3P28288 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.16□□□□□ -1.9
ABCD3P28288 FCF1P8-201ENST00000510322 597 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 AC008716.1-201ENST00000511084 513 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 RAC1P5-201ENST00000512182 576 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.16□□□□□ -1.9
ABCD3P28288 IGKV2-26-201ENST00000518305 343 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 AC022880.1-201ENST00000534017 973 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 AL512310.1-201ENST00000548639 172 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.16□□□□□ -1.9
ABCD3P28288 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.16□□□□□ -1.9
ABCD3P28288 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.16□□□□□ -1.9
ABCD3P28288 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.16□□□□□ -1.9
ABCD3P28288 DEFB131E-202ENST00000602581 683 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 AC012557.2-201ENST00000605919 418 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.16□□□□□ -1.9
ABCD3P28288 AP001596.2-201ENST00000608410 312 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 U6.105-201ENST00000637379 88 ntBASIC3.16□□□□□ -1.9
ABCD3P28288 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ABCD3P28288 ZNF519P1-201ENST00000449011 1626 ntBASIC3.15□□□□□ -1.9
ABCD3P28288 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.9
ABCD3P28288 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.15□□□□□ -1.9
ABCD3P28288 PWAR6-201ENST00000552334 4618 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 AL513302.2-201ENST00000562313 1842 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
ABCD3P28288 Y_RNA.41-201ENST00000362646 102 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 RNU6-996P-201ENST00000365438 107 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ABCD3P28288 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.15□□□□□ -1.91
ABCD3P28288 AC093578.1-201ENST00000415219 368 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ABCD3P28288 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.15□□□□□ -1.91
ABCD3P28288 HMGN2P10-201ENST00000448085 265 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 NDUFB1P2-201ENST00000449477 176 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.15□□□□□ -1.91
ABCD3P28288 RPL23AP67-201ENST00000465341 474 ntBASIC3.15□□□□□ -1.91
ABCD3P28288 AC022493.1-201ENST00000492984 337 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms