Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.66□□□□□ -2.14
COL5A3P25940 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.66□□□□□ -2.14
COL5A3P25940 AC008837.2-201ENST00000513076 418 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
COL5A3P25940 AP005660.1-201ENST00000522972 293 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AP003033.1-201ENST00000527244 415 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC005832.3-201ENST00000537929 631 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
COL5A3P25940 AC087481.2-201ENST00000565492 330 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC093519.1-201ENST00000566109 298 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 MTND1P8-201ENST00000571424 950 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 GLUD1P4-201ENST00000590914 418 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 BNIP3P26-201ENST00000600827 554 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC090116.1-201ENST00000615679 446 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC068787.1-201ENST00000623908 691 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 ICE2P2-201ENST00000483823 2787 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL5A3P25940 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL5A3P25940 RNU6-216P-201ENST00000363282 104 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 SNORD116.1-201ENST00000365628 92 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 Y_RNA.408-201ENST00000383987 102 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 Y_RNA.493-201ENST00000384422 102 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 RNU6-821P-201ENST00000390995 107 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AL355497.1-201ENST00000406262 551 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 U3.40-201ENST00000408706 208 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 RNU4-22P-201ENST00000411058 166 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.66□□□□□ -2.14
COL5A3P25940 C1DP1-201ENST00000426049 402 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 MTND4LP10-201ENST00000435146 291 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 Z80107.1-201ENST00000436830 412 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC007327.1-201ENST00000447461 264 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 ZNF886P-201ENST00000450781 723 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 USP9YP25-201ENST00000457708 443 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC022493.1-201ENST00000492984 337 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.66□□□□□ -2.14
COL5A3P25940 AC114322.1-201ENST00000506771 926 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 RNU6-27P-201ENST00000516146 107 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC023632.1-201ENST00000518463 375 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC022690.1-201ENST00000526681 550 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.66□□□□□ -2.14
COL5A3P25940 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.66□□□□□ -2.14
COL5A3P25940 EEF1B2P4-201ENST00000551398 348 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 MTCYBP27-201ENST00000555160 670 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC068338.1-201ENST00000565567 176 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 RPS15AP11-201ENST00000594193 385 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.66□□□□□ -2.14
COL5A3P25940 AC010738.1-201ENST00000604970 987 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC055876.5-201ENST00000605667 259 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.66□□□□□ -2.14
COL5A3P25940 MIR6076-201ENST00000617521 113 ntBASIC1.66□□□□□ -2.14
COL5A3P25940 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.66□□□□□ -2.14
COL5A3P25940 AP000560.1-201ENST00000624150 1937 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 SNRPEP3-201ENST00000338402 276 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 RNU6-115P-201ENST00000364310 107 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 RNU6-1242P-201ENST00000391052 103 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.65□□□□□ -2.15
COL5A3P25940 RNU6-712P-201ENST00000410558 100 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.65□□□□□ -2.15
COL5A3P25940 MTATP6P20-201ENST00000414147 562 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.65□□□□□ -2.15
COL5A3P25940 MTCO3P1-205ENST00000422088 832 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AC092393.1-201ENST00000439625 742 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.65□□□□□ -2.15
COL5A3P25940 PNPLA4P1-201ENST00000458328 305 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 snoU13.4-201ENST00000458916 104 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 RPS23P3-201ENST00000470993 430 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AC026414.1-201ENST00000504046 698 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.65□□□□□ -2.15
COL5A3P25940 RNU6-885P-201ENST00000516607 104 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 RNA5SP135-201ENST00000517019 125 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.65□□□□□ -2.15
COL5A3P25940 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.65□□□□□ -2.15
COL5A3P25940 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.65□□□□□ -2.15
COL5A3P25940 CYCSP26-201ENST00000534107 320 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AL132857.1-201ENST00000555180 708 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AC009127.3-201ENST00000570531 403 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 MIR151B-201ENST00000584249 96 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AC034229.4-201ENST00000607861 441 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AC106028.5-201ENST00000610332 395 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AL050303.3-201ENST00000613704 284 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AC245884.12-201ENST00000615364 59 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AC008121.3-201ENST00000618726 433 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AC006386.1-201ENST00000619436 415 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AC095031.1-201ENST00000623685 672 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AC231657.1-201ENST00000624313 397 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 AC006927.4-201ENST00000639187 543 ntBASIC1.65□□□□□ -2.15
COL5A3P25940 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
COL5A3P25940 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
COL5A3P25940 RBBP8P1-201ENST00000449447 1844 ntBASIC1.64□□□□□ -2.15
COL5A3P25940 RNA5SP258-201ENST00000362750 119 ntBASIC1.64□□□□□ -2.15
COL5A3P25940 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
COL5A3P25940 SNORA72.3-201ENST00000365074 132 ntBASIC1.64□□□□□ -2.15
COL5A3P25940 RNU6-1032P-201ENST00000384100 107 ntBASIC1.64□□□□□ -2.15
COL5A3P25940 MIR598-201ENST00000384868 97 ntBASIC1.64□□□□□ -2.15
COL5A3P25940 RPS12P24-201ENST00000412619 387 ntBASIC1.64□□□□□ -2.15
COL5A3P25940 AL161449.1-201ENST00000414531 1199 ntBASIC1.64□□□□□ -2.15
COL5A3P25940 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.64□□□□□ -2.15
COL5A3P25940 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.64□□□□□ -2.15
COL5A3P25940 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms