Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 RPS3AP14-201ENST00000483907 780 ntBASIC3.11□□□□□ -1.91
TRIM21P19474 RPL39P36-201ENST00000490784 156 ntBASIC3.11□□□□□ -1.91
TRIM21P19474 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM21P19474 AC117522.3-201ENST00000507974 584 ntBASIC3.11□□□□□ -1.91
TRIM21P19474 SNORA9.3-201ENST00000516383 129 ntBASIC3.11□□□□□ -1.91
TRIM21P19474 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM21P19474 AC022616.3-201ENST00000523940 148 ntBASIC3.11□□□□□ -1.91
TRIM21P19474 AC006362.1-201ENST00000567392 174 ntBASIC3.11□□□□□ -1.91
TRIM21P19474 MIR3167-201ENST00000579623 85 ntBASIC3.11□□□□□ -1.91
TRIM21P19474 AC064872.1-201ENST00000604823 1072 ntBASIC3.11□□□□□ -1.91
TRIM21P19474 AC005000.2-201ENST00000605468 310 ntBASIC3.11□□□□□ -1.91
TRIM21P19474 AC010678.1-201ENST00000614118 713 ntBASIC3.11□□□□□ -1.91
TRIM21P19474 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM21P19474 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM21P19474 AC010680.1-201ENST00000590024 3590 ntBASIC3.11□□□□□ -1.91
TRIM21P19474 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM21P19474 SNORD56.5-201ENST00000364281 72 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 SMIM11P1-201ENST00000369586 178 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 MIR128-1-201ENST00000384921 82 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM21P19474 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM21P19474 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM21P19474 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM21P19474 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM21P19474 AC010153.1-201ENST00000432862 727 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM21P19474 RPL36AP6-201ENST00000435770 321 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.1□□□□□ -1.91
TRIM21P19474 SNRPEP9-201ENST00000436794 238 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM21P19474 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM21P19474 AC007182.2-201ENST00000489251 402 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM21P19474 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM21P19474 RNA5SP471-201ENST00000516971 106 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 SNORA31.21-201ENST00000517180 77 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM21P19474 HPRT1P3-201ENST00000539521 576 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM21P19474 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM21P19474 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM21P19474 MTCO3P13-201ENST00000577757 781 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 RSL24D1P11-201ENST00000591045 491 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 AL451007.1-201ENST00000595491 289 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 BNIP3P9-201ENST00000603714 553 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 AL358072.1-201ENST00000604156 575 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 AC048344.4-201ENST00000619744 527 ntBASIC3.1□□□□□ -1.91
TRIM21P19474 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM21P19474 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM21P19474 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM21P19474 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM21P19474 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM21P19474 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM21P19474 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM21P19474 RNU6-288P-201ENST00000363690 104 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 RNA5SP139-201ENST00000364340 117 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 RNU6-512P-201ENST00000364438 103 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 RNU6-946P-201ENST00000383878 107 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 RNU6-1027P-201ENST00000383998 107 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 RNU6-14P-201ENST00000384630 106 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 MIR558-201ENST00000384920 94 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 MIR888-201ENST00000401186 77 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 RNU2-39P-201ENST00000410604 198 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 RNU6-195P-201ENST00000411352 109 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 RPS12P24-201ENST00000412619 387 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 AL096701.2-201ENST00000416920 238 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 PIGFP2-201ENST00000421400 651 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM21P19474 RNU7-23P-201ENST00000459465 62 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 AC011825.1-201ENST00000484967 388 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 AC117522.1-201ENST00000509821 380 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM21P19474 RNA5SP76-201ENST00000516277 87 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM21P19474 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM21P19474 AC068135.2-201ENST00000569293 1028 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 MIR3200-201ENST00000580767 85 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 AC068790.2-201ENST00000602601 557 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 NUTF2P8-201ENST00000604593 363 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 AL136363.1-201ENST00000605349 337 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 AC004805.2-201ENST00000605382 482 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 MIR98-201ENST00000606724 119 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 MTND5P42-201ENST00000637720 498 ntBASIC3.09□□□□□ -1.91
TRIM21P19474 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
TRIM21P19474 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
TRIM21P19474 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM21P19474 AC092593.1-201ENST00000515413 1815 ntBASIC3.08□□□□□ -1.92
TRIM21P19474 AP003122.5-201ENST00000527668 3766 ntBASIC3.08□□□□□ -1.92
TRIM21P19474 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM21P19474 RNU6-188P-201ENST00000364207 107 ntBASIC3.08□□□□□ -1.92
TRIM21P19474 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM21P19474 RNU6-641P-201ENST00000384006 107 ntBASIC3.08□□□□□ -1.92
TRIM21P19474 RNU6-39P-201ENST00000384344 107 ntBASIC3.08□□□□□ -1.92
TRIM21P19474 AL139397.2-201ENST00000404529 772 ntBASIC3.08□□□□□ -1.92
TRIM21P19474 RNU2-68P-201ENST00000410878 191 ntBASIC3.08□□□□□ -1.92
TRIM21P19474 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM21P19474 MTND3P17-201ENST00000416968 344 ntBASIC3.08□□□□□ -1.92
TRIM21P19474 ISCA1P1-201ENST00000426679 387 ntBASIC3.08□□□□□ -1.92
TRIM21P19474 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.08□□□□□ -1.92
TRIM21P19474 AL353706.1-201ENST00000436728 494 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms