Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 AC012254.4-201ENST00000588843 273 ntBASIC0.51□□□□□ -2.33
ACANP16112 AC107214.2-201ENST00000608204 634 ntBASIC0.51□□□□□ -2.33
ACANP16112 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.51□□□□□ -2.33
ACANP16112 AC109809.1-201ENST00000619665 545 ntBASIC0.51□□□□□ -2.33
ACANP16112 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
ACANP16112 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
ACANP16112 AL442644.1-201ENST00000454390 3105 ntBASIC0.51□□□□□ -2.33
ACANP16112 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
ACANP16112 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.5□□□□□ -2.33
ACANP16112 SNORA16B-201ENST00000364674 135 ntBASIC0.5□□□□□ -2.33
ACANP16112 Y_RNA.413-201ENST00000384007 102 ntBASIC0.5□□□□□ -2.33
ACANP16112 RNU6-1181P-201ENST00000384191 106 ntBASIC0.5□□□□□ -2.33
ACANP16112 SNORA1.3-201ENST00000384676 136 ntBASIC0.5□□□□□ -2.33
ACANP16112 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
ACANP16112 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.5□□□□□ -2.33
ACANP16112 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.5□□□□□ -2.33
ACANP16112 Y_RNA.754-201ENST00000476024 102 ntBASIC0.5□□□□□ -2.33
ACANP16112 AC103851.1-201ENST00000506833 274 ntBASIC0.5□□□□□ -2.33
ACANP16112 COL6A4P2-205ENST00000509855 506 ntBASIC0.5□□□□□ -2.33
ACANP16112 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.5□□□□□ -2.33
ACANP16112 LINC00933-203ENST00000559812 219 ntBASIC0.5□□□□□ -2.33
ACANP16112 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.5□□□□□ -2.33
ACANP16112 RSL24D1P11-201ENST00000591045 491 ntBASIC0.5□□□□□ -2.33
ACANP16112 NUTF2P8-201ENST00000604593 363 ntBASIC0.5□□□□□ -2.33
ACANP16112 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.5□□□□□ -2.33
ACANP16112 Y_RNA.790-201ENST00000614282 102 ntBASIC0.5□□□□□ -2.33
ACANP16112 Y_RNA.782-201ENST00000614695 102 ntBASIC0.5□□□□□ -2.33
ACANP16112 U4.2-201ENST00000618561 85 ntBASIC0.5□□□□□ -2.33
ACANP16112 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.5□□□□□ -2.33
ACANP16112 AL356473.1-201ENST00000406203 1408 ntBASIC0.5□□□□□ -2.33
ACANP16112 CBX3P1-201ENST00000325243 554 ntBASIC0.5□□□□□ -2.33
ACANP16112 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
ACANP16112 MTCO1P3-201ENST00000429327 192 ntBASIC0.5□□□□□ -2.33
ACANP16112 RPL30P11-201ENST00000495304 339 ntBASIC0.5□□□□□ -2.33
ACANP16112 HMGB1P22-201ENST00000505315 124 ntBASIC0.5□□□□□ -2.33
ACANP16112 AC004062.1-201ENST00000509926 645 ntBASIC0.5□□□□□ -2.33
ACANP16112 RNU2-19P-201ENST00000517288 84 ntBASIC0.5□□□□□ -2.33
ACANP16112 CYCSP2-201ENST00000558168 301 ntBASIC0.5□□□□□ -2.33
ACANP16112 AC107954.1-201ENST00000565906 727 ntBASIC0.5□□□□□ -2.33
ACANP16112 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.5□□□□□ -2.33
ACANP16112 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.5□□□□□ -2.33
ACANP16112 AC096586.2-201ENST00000610260 441 ntBASIC0.5□□□□□ -2.33
ACANP16112 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.5□□□□□ -2.33
ACANP16112 MTCO1P23-201ENST00000415223 1526 ntBASIC0.5□□□□□ -2.33
ACANP16112 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
ACANP16112 AC007785.2-201ENST00000598627 1916 ntBASIC0.49□□□□□ -2.33
ACANP16112 Y_RNA.18-201ENST00000362461 102 ntBASIC0.49□□□□□ -2.33
ACANP16112 Y_RNA.35-201ENST00000362601 101 ntBASIC0.49□□□□□ -2.33
ACANP16112 RNA5SP25-201ENST00000410815 110 ntBASIC0.49□□□□□ -2.33
ACANP16112 RPL21P32-201ENST00000419877 477 ntBASIC0.49□□□□□ -2.33
ACANP16112 RPL7P30-201ENST00000420888 709 ntBASIC0.49□□□□□ -2.33
ACANP16112 AC060773.1-201ENST00000421698 310 ntBASIC0.49□□□□□ -2.33
ACANP16112 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.49□□□□□ -2.33
ACANP16112 UBE2D3P2-201ENST00000424409 445 ntBASIC0.49□□□□□ -2.33
ACANP16112 AL591043.1-201ENST00000432461 424 ntBASIC0.49□□□□□ -2.33
ACANP16112 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.49□□□□□ -2.33
ACANP16112 snoU109.1-201ENST00000459339 135 ntBASIC0.49□□□□□ -2.33
ACANP16112 SETP11-201ENST00000473027 690 ntBASIC0.49□□□□□ -2.33
ACANP16112 KLRA1P-201ENST00000503499 986 ntBASIC0.49□□□□□ -2.33
ACANP16112 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.49□□□□□ -2.33
ACANP16112 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
ACANP16112 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.49□□□□□ -2.33
ACANP16112 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.49□□□□□ -2.33
ACANP16112 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.49□□□□□ -2.33
ACANP16112 SDR42E1P2-201ENST00000614861 481 ntBASIC0.49□□□□□ -2.33
ACANP16112 MIR6718-201ENST00000616153 80 ntBASIC0.49□□□□□ -2.33
ACANP16112 SDR42E1P4-201ENST00000620894 481 ntBASIC0.49□□□□□ -2.33
ACANP16112 AC073592.7-201ENST00000623659 507 ntBASIC0.49□□□□□ -2.33
ACANP16112 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.49□□□□□ -2.33
ACANP16112 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
ACANP16112 SNORA3A-201ENST00000364113 130 ntBASIC0.49□□□□□ -2.33
ACANP16112 Y_RNA.453-201ENST00000384223 109 ntBASIC0.49□□□□□ -2.33
ACANP16112 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
ACANP16112 RNA5SP63-201ENST00000391225 112 ntBASIC0.49□□□□□ -2.33
ACANP16112 RN7SKP61-201ENST00000410642 295 ntBASIC0.49□□□□□ -2.33
ACANP16112 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.49□□□□□ -2.33
ACANP16112 AL357134.1-201ENST00000445848 426 ntBASIC0.49□□□□□ -2.33
ACANP16112 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.49□□□□□ -2.33
ACANP16112 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.49□□□□□ -2.33
ACANP16112 RNA5SP134-201ENST00000516492 96 ntBASIC0.49□□□□□ -2.33
ACANP16112 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
ACANP16112 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.49□□□□□ -2.33
ACANP16112 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.49□□□□□ -2.33
ACANP16112 OR5B19P-201ENST00000531766 928 ntBASIC0.49□□□□□ -2.33
ACANP16112 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.49□□□□□ -2.33
ACANP16112 AC007834.2-201ENST00000536310 343 ntBASIC0.49□□□□□ -2.33
ACANP16112 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.49□□□□□ -2.33
ACANP16112 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.49□□□□□ -2.33
ACANP16112 ELOCP5-201ENST00000604924 333 ntBASIC0.49□□□□□ -2.33
ACANP16112 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.49□□□□□ -2.33
ACANP16112 AL022578.1-201ENST00000439330 1433 ntBASIC0.48□□□□□ -2.33
ACANP16112 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.48□□□□□ -2.33
ACANP16112 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.48□□□□□ -2.33
ACANP16112 MIR126-201ENST00000362291 85 ntBASIC0.48□□□□□ -2.33
ACANP16112 Y_RNA.185-201ENST00000363894 100 ntBASIC0.48□□□□□ -2.33
ACANP16112 AL022718.1-201ENST00000412004 84 ntBASIC0.48□□□□□ -2.33
ACANP16112 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.48□□□□□ -2.33
ACANP16112 AC083875.1-201ENST00000419509 405 ntBASIC0.48□□□□□ -2.33
ACANP16112 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.48□□□□□ -2.33
ACANP16112 AL353706.1-201ENST00000436728 494 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms