Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 MIR5684-201ENST00000585074 65 ntBASIC4.44□□□□□ -1.7
ITGA4P13612 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.44□□□□□ -1.7
ITGA4P13612 AC005344.1-201ENST00000613391 459 ntBASIC4.44□□□□□ -1.7
ITGA4P13612 AC131238.1-201ENST00000617135 328 ntBASIC4.44□□□□□ -1.7
ITGA4P13612 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ITGA4P13612 AL162373.1-201ENST00000620433 407 ntBASIC4.44□□□□□ -1.7
ITGA4P13612 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ITGA4P13612 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.44□□□□□ -1.7
ITGA4P13612 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
ITGA4P13612 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
ITGA4P13612 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.44□□□□□ -1.7
ITGA4P13612 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ITGA4P13612 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
ITGA4P13612 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.44□□□□□ -1.7
ITGA4P13612 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ITGA4P13612 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
ITGA4P13612 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ITGA4P13612 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.43□□□□□ -1.7
ITGA4P13612 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ITGA4P13612 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
ITGA4P13612 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ITGA4P13612 RNU6-842P-201ENST00000384269 107 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 RNU6-1179P-201ENST00000384667 107 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 SNORA48.7-201ENST00000391302 135 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 RNU2-3P-201ENST00000410144 191 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 AC243428.1-201ENST00000421099 264 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 MTCYBP9-201ENST00000431021 303 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.43□□□□□ -1.7
ITGA4P13612 RANP8-201ENST00000444720 713 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 AL451050.1-201ENST00000450126 415 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 AC010285.1-201ENST00000470580 392 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 RPL7P5-201ENST00000471472 736 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 AC020593.1-201ENST00000507399 299 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.43□□□□□ -1.7
ITGA4P13612 AC008716.1-201ENST00000511084 513 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.43□□□□□ -1.7
ITGA4P13612 RNU6-1315P-201ENST00000517187 99 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.43□□□□□ -1.7
ITGA4P13612 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.43□□□□□ -1.7
ITGA4P13612 AC120057.2-201ENST00000571520 271 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 AC025627.2-201ENST00000576220 160 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 AC006130.2-201ENST00000586202 326 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ITGA4P13612 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ITGA4P13612 AC098826.3-201ENST00000603823 466 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 AC034229.5-201ENST00000624258 185 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 AC138305.3-201ENST00000624988 240 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.43□□□□□ -1.7
ITGA4P13612 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
ITGA4P13612 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
ITGA4P13612 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ITGA4P13612 Z73965.1-201ENST00000623412 2297 ntBASIC4.43□□□□□ -1.7
ITGA4P13612 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.43□□□□□ -1.7
ITGA4P13612 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.42□□□□□ -1.7
ITGA4P13612 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ITGA4P13612 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ITGA4P13612 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ITGA4P13612 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ITGA4P13612 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ITGA4P13612 RNU6-1167P-201ENST00000363227 94 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ITGA4P13612 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.42□□□□□ -1.7
ITGA4P13612 AL353621.1-201ENST00000418219 243 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 AC091390.3-201ENST00000426478 338 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.42□□□□□ -1.7
ITGA4P13612 AL358472.1-201ENST00000431295 329 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 RPL23AP50-201ENST00000434149 455 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.42□□□□□ -1.7
ITGA4P13612 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.42□□□□□ -1.7
ITGA4P13612 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.42□□□□□ -1.7
ITGA4P13612 SNORD108-201ENST00000459332 71 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 AC018437.1-201ENST00000492214 406 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 AC022493.1-201ENST00000492984 337 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.42□□□□□ -1.7
ITGA4P13612 RNU6-143P-201ENST00000516942 93 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 AC023632.4-201ENST00000517783 191 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.42□□□□□ -1.7
ITGA4P13612 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.42□□□□□ -1.7
ITGA4P13612 AC008269.2-201ENST00000561915 1105 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ITGA4P13612 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.42□□□□□ -1.7
ITGA4P13612 SNRPGP15-201ENST00000600149 222 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 AC107294.1-201ENST00000609524 467 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 MIR6868-201ENST00000611215 58 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 MIR7702-201ENST00000621931 59 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.42□□□□□ -1.7
ITGA4P13612 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ITGA4P13612 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ITGA4P13612 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ITGA4P13612 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
ITGA4P13612 AC005183.1-201ENST00000603687 1979 ntBASIC4.42□□□□□ -1.7
ITGA4P13612 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ITGA4P13612 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ITGA4P13612 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
ITGA4P13612 CDC27P3-201ENST00000635418 1910 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ITGA4P13612 DEFB108F-201ENST00000344638 222 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 SNORD35B-201ENST00000363660 87 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 Y_RNA.557-201ENST00000384680 107 ntBASIC4.41□□□□□ -1.7
ITGA4P13612 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms