Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 FTH1P15-201ENST00000406984 280 ntBASIC0.76□□□□□ -2.29
TOP2AP11388 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.76□□□□□ -2.29
TOP2AP11388 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.76□□□□□ -2.29
TOP2AP11388 AL513343.1-201ENST00000451818 792 ntBASIC0.76□□□□□ -2.29
TOP2AP11388 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.76□□□□□ -2.29
TOP2AP11388 NIFKP6-201ENST00000598115 845 ntBASIC0.76□□□□□ -2.29
TOP2AP11388 LINC02211-204ENST00000642024 1070 ntBASIC0.76□□□□□ -2.29
TOP2AP11388 AC083875.1-201ENST00000419509 405 ntBASIC0.75□□□□□ -2.29
TOP2AP11388 AC114737.2-201ENST00000421583 173 ntBASIC0.75□□□□□ -2.29
TOP2AP11388 AC096920.1-201ENST00000423991 241 ntBASIC0.75□□□□□ -2.29
TOP2AP11388 DYNLT3P2-201ENST00000442517 295 ntBASIC0.75□□□□□ -2.29
TOP2AP11388 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.75□□□□□ -2.29
TOP2AP11388 CYP2C61P-201ENST00000604072 290 ntBASIC0.75□□□□□ -2.29
TOP2AP11388 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.74□□□□□ -2.29
TOP2AP11388 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
TOP2AP11388 AC092634.2-201ENST00000428146 1010 ntBASIC0.74□□□□□ -2.29
TOP2AP11388 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
TOP2AP11388 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
TOP2AP11388 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.74□□□□□ -2.29
TOP2AP11388 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.74□□□□□ -2.29
TOP2AP11388 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
TOP2AP11388 SNORA1.3-201ENST00000384676 136 ntBASIC0.74□□□□□ -2.29
TOP2AP11388 RPL21P32-201ENST00000419877 477 ntBASIC0.74□□□□□ -2.29
TOP2AP11388 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.74□□□□□ -2.29
TOP2AP11388 UBE2D3P2-201ENST00000424409 445 ntBASIC0.74□□□□□ -2.29
TOP2AP11388 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.74□□□□□ -2.29
TOP2AP11388 RNA5SP395-201ENST00000516567 118 ntBASIC0.74□□□□□ -2.29
TOP2AP11388 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.74□□□□□ -2.29
TOP2AP11388 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.74□□□□□ -2.29
TOP2AP11388 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.74□□□□□ -2.29
TOP2AP11388 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.74□□□□□ -2.29
TOP2AP11388 NDUFB4P7-201ENST00000423198 363 ntBASIC0.73□□□□□ -2.29
TOP2AP11388 SNORA31.13-201ENST00000516624 135 ntBASIC0.73□□□□□ -2.29
TOP2AP11388 AC025857.1-201ENST00000525252 377 ntBASIC0.73□□□□□ -2.29
TOP2AP11388 COX6CP3-201ENST00000580869 223 ntBASIC0.73□□□□□ -2.29
TOP2AP11388 RNA5SP212-201ENST00000391223 107 ntBASIC0.72□□□□□ -2.29
TOP2AP11388 PRPS1P1-201ENST00000445305 876 ntBASIC0.72□□□□□ -2.29
TOP2AP11388 AC112518.2-201ENST00000508565 425 ntBASIC0.72□□□□□ -2.29
TOP2AP11388 LRRC34P2-201ENST00000514850 553 ntBASIC0.72□□□□□ -2.29
TOP2AP11388 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.72□□□□□ -2.29
TOP2AP11388 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.72□□□□□ -2.29
TOP2AP11388 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.72□□□□□ -2.29
TOP2AP11388 MIR4514-201ENST00000581410 57 ntBASIC0.72□□□□□ -2.29
TOP2AP11388 AC138473.1-201ENST00000605717 526 ntBASIC0.72□□□□□ -2.29
TOP2AP11388 AC024595.1-201ENST00000623088 387 ntBASIC0.72□□□□□ -2.29
TOP2AP11388 AC067863.3-201ENST00000624172 122 ntBASIC0.72□□□□□ -2.29
TOP2AP11388 MIR5087-201ENST00000635826 76 ntBASIC0.72□□□□□ -2.29
TOP2AP11388 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.71□□□□□ -2.3
TOP2AP11388 RNU6-1164P-201ENST00000364428 107 ntBASIC0.71□□□□□ -2.3
TOP2AP11388 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.71□□□□□ -2.3
TOP2AP11388 PTENP1-201ENST00000447117 1215 ntBASIC0.71□□□□□ -2.3
TOP2AP11388 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.71□□□□□ -2.3
TOP2AP11388 AC011472.4-201ENST00000615848 491 ntBASIC0.71□□□□□ -2.3
TOP2AP11388 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
TOP2AP11388 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.7□□□□□ -2.3
TOP2AP11388 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.7□□□□□ -2.3
TOP2AP11388 UBL5P1-201ENST00000507979 193 ntBASIC0.7□□□□□ -2.3
TOP2AP11388 AC104108.1-201ENST00000509930 412 ntBASIC0.7□□□□□ -2.3
TOP2AP11388 RNU6-322P-201ENST00000516010 103 ntBASIC0.7□□□□□ -2.3
TOP2AP11388 AC118273.2-201ENST00000532092 465 ntBASIC0.7□□□□□ -2.3
TOP2AP11388 LINC00557-201ENST00000563184 1279 ntBASIC0.7□□□□□ -2.3
TOP2AP11388 AC016925.2-201ENST00000605108 242 ntBASIC0.7□□□□□ -2.3
TOP2AP11388 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.7□□□□□ -2.3
TOP2AP11388 RPL37P6-202ENST00000464216 403 ntBASIC0.69□□□□□ -2.3
TOP2AP11388 DYNLL1P5-201ENST00000467158 270 ntBASIC0.69□□□□□ -2.3
TOP2AP11388 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.69□□□□□ -2.3
TOP2AP11388 AL161629.2-201ENST00000615347 275 ntBASIC0.69□□□□□ -2.3
TOP2AP11388 AC083865.1-201ENST00000636634 831 ntBASIC0.69□□□□□ -2.3
TOP2AP11388 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
TOP2AP11388 CR848007.1-201ENST00000442354 1699 ntBASIC0.69□□□□□ -2.3
TOP2AP11388 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TOP2AP11388 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
TOP2AP11388 UBE2V2P3-201ENST00000433562 437 ntBASIC0.69□□□□□ -2.3
TOP2AP11388 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.69□□□□□ -2.3
TOP2AP11388 AL121890.5-201ENST00000620848 304 ntBASIC0.69□□□□□ -2.3
TOP2AP11388 AP002791.1-201ENST00000623291 381 ntBASIC0.69□□□□□ -2.3
TOP2AP11388 AP006248.3-201ENST00000623580 594 ntBASIC0.69□□□□□ -2.3
TOP2AP11388 Z69720.2-201ENST00000624755 279 ntBASIC0.69□□□□□ -2.3
TOP2AP11388 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
TOP2AP11388 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
TOP2AP11388 RPL31P35-201ENST00000431058 377 ntBASIC0.68□□□□□ -2.3
TOP2AP11388 AC073614.1-201ENST00000438690 650 ntBASIC0.68□□□□□ -2.3
TOP2AP11388 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.68□□□□□ -2.3
TOP2AP11388 AC099513.1-201ENST00000490423 301 ntBASIC0.68□□□□□ -2.3
TOP2AP11388 RNU6-362P-201ENST00000516736 90 ntBASIC0.68□□□□□ -2.3
TOP2AP11388 SNORA44.1-201ENST00000517031 108 ntBASIC0.68□□□□□ -2.3
TOP2AP11388 HMGN1P30-201ENST00000589286 268 ntBASIC0.68□□□□□ -2.3
TOP2AP11388 AC012676.2-201ENST00000619258 186 ntBASIC0.68□□□□□ -2.3
TOP2AP11388 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TOP2AP11388 SSXP10-201ENST00000402595 565 ntBASIC0.67□□□□□ -2.3
TOP2AP11388 SNRPEP7-201ENST00000438350 220 ntBASIC0.67□□□□□ -2.3
TOP2AP11388 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TOP2AP11388 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.67□□□□□ -2.3
TOP2AP11388 UCA1.1-201ENST00000620952 75 ntBASIC0.67□□□□□ -2.3
TOP2AP11388 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.66□□□□□ -2.3
TOP2AP11388 VN1R42P-201ENST00000424651 344 ntBASIC0.66□□□□□ -2.3
TOP2AP11388 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.66□□□□□ -2.3
TOP2AP11388 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.66□□□□□ -2.3
TOP2AP11388 7SK.7-201ENST00000603504 247 ntBASIC0.66□□□□□ -2.3
TOP2AP11388 DUXAP10-204ENST00000612052 616 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms