Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 BX842559.1-201ENST00000419615 532 ntBASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 AL445584.1-201ENST00000431451 330 ntBASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 RPS3AP12-201ENST00000443616 753 ntBASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 AC025423.5-201ENST00000550230 219 ntBASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 AC090517.1-201ENST00000569307 266 ntBASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 AC009779.6-201ENST00000603972 165 ntBASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 MIR15A-201ENST00000607334 83 ntBASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CSB-PGBD3P0DP91 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 RNU1-83P-201ENST00000363426 164 ntBASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 RNU4-42P-201ENST00000364738 142 ntBASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 RNU6-338P-201ENST00000383888 105 ntBASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 AP000275.1-201ENST00000411943 390 ntBASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 Z74021.1-201ENST00000423610 407 ntBASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 AL359672.1-201ENST00000442302 409 ntBASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 RNU7-187P-201ENST00000458985 68 ntBASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 AL049874.1-201ENST00000489560 388 ntBASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 AC092436.3-201ENST00000511788 257 ntBASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 RNA5SP73-201ENST00000516744 108 ntBASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 AC090151.1-201ENST00000520784 730 ntBASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 IFITM8P-201ENST00000522529 394 ntBASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 AC015914.2-201ENST00000618167 288 ntBASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 CR392039.5-201ENST00000623201 510 ntBASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 U6.104-201ENST00000637979 90 ntBASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CSB-PGBD3P0DP91 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 SDAD1P2-201ENST00000441308 2028 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 MIR208A-201ENST00000362287 71 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 RNU1-20P-201ENST00000363314 162 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 SNORD27-201ENST00000363981 72 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 Y_RNA.539-201ENST00000384635 107 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 Y_RNA.551-201ENST00000384661 102 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 AL513331.1-201ENST00000411908 397 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 AC104332.1-201ENST00000440471 797 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 AC008264.1-201ENST00000447612 367 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 RPL23AP81-201ENST00000455252 467 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 RPL37P6-201ENST00000460682 294 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 AC020890.1-201ENST00000491837 504 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 RNU6-927P-201ENST00000516199 100 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 RNU6-397P-201ENST00000516226 104 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 HSPE1P5-201ENST00000561489 272 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 AC130289.1-201ENST00000577321 73 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 MIR5685-201ENST00000579080 79 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 AC010900.2-201ENST00000604508 210 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 AC039056.2-201ENST00000622261 511 ntBASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CSB-PGBD3P0DP91 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 Y_RNA.20-201ENST00000362479 113 ntBASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 TOMM22P1-201ENST00000418578 312 ntBASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 MTCO3P8-201ENST00000453691 755 ntBASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 MED28P2-201ENST00000475771 317 ntBASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 AC093852.1-201ENST00000503587 266 ntBASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 HMGB1P22-201ENST00000505315 124 ntBASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 Y_RNA.700-201ENST00000516806 100 ntBASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.66□□□□□ -1.5
CSB-PGBD3P0DP91 AC109446.1-201ENST00000566172 220 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms