Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AL034351.1-201ENST00000605288 668 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 AL050343.2-201ENST00000607338 280 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 TUG1_2.1-201ENST00000614234 87 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 AC090574.1-201ENST00000623186 233 ntBASIC4.13□□□□□ -1.75
SNRPA1P09661 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.13□□□□□ -1.75
SNRPA1P09661 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNRPA1P09661 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
SNRPA1P09661 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SNRPA1P09661 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SNRPA1P09661 Y_RNA.67-201ENST00000362870 100 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 RNU6-61P-201ENST00000365528 109 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 Y_RNA.373-201ENST00000365600 103 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 Y_RNA.460-201ENST00000384255 102 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 AL138885.1-201ENST00000405921 675 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 TXNP7-201ENST00000406296 293 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 OR6C66P-201ENST00000414917 930 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 RPL7L1P10-201ENST00000427790 463 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.12□□□□□ -1.75
SNRPA1P09661 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.12□□□□□ -1.75
SNRPA1P09661 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.12□□□□□ -1.75
SNRPA1P09661 RNU7-180P-201ENST00000459240 63 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 AC021205.2-201ENST00000480069 347 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 AC078918.1-201ENST00000498515 228 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 AC005921.1-201ENST00000510589 286 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 RNU6-277P-201ENST00000516272 106 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 MIR2276-201ENST00000516886 89 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.12□□□□□ -1.75
SNRPA1P09661 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.12□□□□□ -1.75
SNRPA1P09661 EIF4BP1-201ENST00000554881 351 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 AL451007.1-201ENST00000595491 289 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 AC007687.1-201ENST00000602704 304 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 FRG1KP-201ENST00000623592 341 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.12□□□□□ -1.75
SNRPA1P09661 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNRPA1P09661 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.12□□□□□ -1.75
SNRPA1P09661 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SNRPA1P09661 GABPAP-201ENST00000419271 1356 ntBASIC4.12□□□□□ -1.75
SNRPA1P09661 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNRPA1P09661 DDX10P1-201ENST00000448545 1933 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNRPA1P09661 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SNRPA1P09661 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.11□□□□□ -1.75
SNRPA1P09661 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.11□□□□□ -1.75
SNRPA1P09661 RNU6-1155P-201ENST00000363554 107 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 RNU6-960P-201ENST00000364056 120 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 SNORD115-7-201ENST00000365306 82 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 RNU6-831P-201ENST00000384548 107 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 Y_RNA.576-201ENST00000384781 102 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.11□□□□□ -1.75
SNRPA1P09661 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.11□□□□□ -1.75
SNRPA1P09661 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.11□□□□□ -1.75
SNRPA1P09661 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.11□□□□□ -1.75
SNRPA1P09661 MTCO3P45-201ENST00000443036 613 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 GAPDHP27-201ENST00000447427 1020 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 AC233279.1-201ENST00000455300 423 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.11□□□□□ -1.75
SNRPA1P09661 SNRPFP3-201ENST00000457792 225 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 SNORA59A-201ENST00000459326 152 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.11□□□□□ -1.75
SNRPA1P09661 AC010631.1-201ENST00000474150 156 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.11□□□□□ -1.75
SNRPA1P09661 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SNRPA1P09661 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.11□□□□□ -1.75
SNRPA1P09661 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.11□□□□□ -1.75
SNRPA1P09661 AC109635.4-202ENST00000531666 412 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.11□□□□□ -1.75
SNRPA1P09661 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.11□□□□□ -1.75
SNRPA1P09661 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.11□□□□□ -1.75
SNRPA1P09661 AL118558.2-201ENST00000556294 238 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 AC026464.5-201ENST00000562497 722 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 UBL5P2-201ENST00000583788 219 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 MIR4424-201ENST00000585257 86 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 AL137843.1-201ENST00000605078 385 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 AL450472.3-201ENST00000615578 367 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 SNHG22-203ENST00000617833 660 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 AL589994.2-201ENST00000621124 579 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
SNRPA1P09661 ZNF807-201ENST00000328088 1707 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNRPA1P09661 EXOC5P1-201ENST00000510543 1969 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 AC118273.1-201ENST00000525324 3006 ntBASIC4.11□□□□□ -1.75
SNRPA1P09661 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SNRPA1P09661 RNU6-1284P-201ENST00000363701 100 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 RNU6-522P-201ENST00000364497 107 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 SNORA51.2-201ENST00000364595 132 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 Y_RNA.419-201ENST00000384041 102 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 AC099677.1-201ENST00000420575 175 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.1□□□□□ -1.75
SNRPA1P09661 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.1□□□□□ -1.75
SNRPA1P09661 PPP1R2P5-201ENST00000457256 603 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 RNU6-329P-201ENST00000459618 107 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 RPS27AP1-201ENST00000475545 471 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.1□□□□□ -1.75
SNRPA1P09661 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.1□□□□□ -1.75
SNRPA1P09661 AC108078.2-201ENST00000510750 236 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.1□□□□□ -1.75
SNRPA1P09661 RNU2-58P-201ENST00000516403 183 ntBASIC4.1□□□□□ -1.75
SNRPA1P09661 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms