Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 NACAP2-201ENST00000318548 624 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 AC062016.1-201ENST00000355719 319 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC6P09630 Y_RNA.529-201ENST00000384586 119 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 MIR1250-201ENST00000408098 113 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 AL645937.1-202ENST00000421799 937 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 NUP35P1-201ENST00000422734 947 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 MTCYBP8-201ENST00000422855 651 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 AC018630.2-202ENST00000422992 927 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC6P09630 AC137499.1-201ENST00000427602 88 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC6P09630 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 MTND4LP16-201ENST00000440828 295 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 AL049830.2-201ENST00000480072 201 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 RPS4XP22-201ENST00000480755 780 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 RN7SL432P-201ENST00000484057 298 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC6P09630 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXC6P09630 RNU1-143P-201ENST00000516296 146 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 RNU6-410P-201ENST00000517006 107 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC6P09630 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC6P09630 AC128657.1-201ENST00000549459 145 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC6P09630 AC055876.1-202ENST00000567053 138 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 MIR4319-201ENST00000577285 85 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 OR4K8P-201ENST00000578842 1048 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 MIR4719-201ENST00000585233 84 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 AC010525.2-201ENST00000590920 195 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 AP001429.1-201ENST00000602568 530 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 U1.23-201ENST00000610293 146 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 AL591516.1-201ENST00000611326 274 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 RNU1-68P-201ENST00000615382 146 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 U7.8-201ENST00000619968 63 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 U1.39-201ENST00000621562 146 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 AC100810.6-201ENST00000638068 285 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC6P09630 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC6P09630 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC6P09630 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC6P09630 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
HOXC6P09630 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
HOXC6P09630 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HOXC6P09630 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC6P09630 RNU1-75P-201ENST00000347264 129 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 Y_RNA.367-201ENST00000365544 101 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 RNU6-278P-201ENST00000390945 109 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 RNU6-332P-201ENST00000391193 108 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 AL354719.1-201ENST00000406535 843 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC6P09630 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXC6P09630 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXC6P09630 AL513185.2-201ENST00000425543 193 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXC6P09630 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXC6P09630 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 RPS20P5-201ENST00000434808 360 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 RPS24P13-201ENST00000442520 397 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC6P09630 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXC6P09630 AL136097.1-201ENST00000456945 913 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 RNU7-63P-201ENST00000459054 62 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC6P09630 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC6P09630 AC010486.1-201ENST00000511793 424 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXC6P09630 HMGB1P41-201ENST00000520234 440 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 AC103783.1-201ENST00000520506 373 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 AC104027.1-201ENST00000521887 300 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 SUB1P1-201ENST00000524415 382 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 AP000857.1-201ENST00000532151 543 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 ARL2BPP2-201ENST00000550907 489 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 SETP7-201ENST00000552169 453 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC6P09630 AL133153.1-201ENST00000557756 303 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.42□□□□□ -1.86
HOXC6P09630 AC013412.1-201ENST00000610687 192 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 DISC2.1-201ENST00000612827 205 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 AC091903.1-201ENST00000624322 454 ntBASIC3.42□□□□□ -1.86
HOXC6P09630 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC6P09630 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
HOXC6P09630 RNU6-1078P-201ENST00000364522 103 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 RNU6-996P-201ENST00000365438 107 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC6P09630 RNU6-606P-201ENST00000384721 111 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 RNU2-37P-201ENST00000410695 177 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC6P09630 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.41□□□□□ -1.86
HOXC6P09630 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC6P09630 RPL36AP53-201ENST00000432891 316 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 MTATP6P16-201ENST00000434543 526 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 CALM1P1-201ENST00000442082 433 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 AC093019.1-201ENST00000443135 252 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC6P09630 AC079781.2-201ENST00000446424 169 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 AC108938.1-201ENST00000451204 136 ntBASIC3.41□□□□□ -1.86
HOXC6P09630 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXC6P09630 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC6P09630 ST13P14-201ENST00000474095 734 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms