Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC104982.1-201ENST00000478775 574 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.53□□□□□ -2.16
COL4A2P08572 RPL30P5-201ENST00000494923 336 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.53□□□□□ -2.16
COL4A2P08572 AC092436.3-201ENST00000511788 257 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 AC006499.2-201ENST00000513470 337 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 AC093677.1-201ENST00000514414 678 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.53□□□□□ -2.16
COL4A2P08572 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.53□□□□□ -2.16
COL4A2P08572 AC124947.2-202ENST00000552735 133 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 HMGB1P14-201ENST00000557424 591 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.53□□□□□ -2.16
COL4A2P08572 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.53□□□□□ -2.16
COL4A2P08572 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 AP005136.1-201ENST00000579765 429 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 AL161729.4-201ENST00000604650 476 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 AC024060.1-201ENST00000607052 494 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.53□□□□□ -2.16
COL4A2P08572 AC008443.7-201ENST00000622195 246 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.53□□□□□ -2.16
COL4A2P08572 AP000676.4-201ENST00000624659 623 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.53□□□□□ -2.16
COL4A2P08572 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.53□□□□□ -2.16
COL4A2P08572 AL049641.1-201ENST00000441055 1948 ntBASIC1.53□□□□□ -2.16
COL4A2P08572 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.17
COL4A2P08572 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.53□□□□□ -2.17
COL4A2P08572 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.53□□□□□ -2.17
COL4A2P08572 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
COL4A2P08572 RNU6-1207P-201ENST00000384343 107 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 MTATP6P19-201ENST00000413797 659 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A2P08572 TAAR7P-201ENST00000436141 242 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AC092155.2-201ENST00000454675 477 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 TOMM22P6-201ENST00000465035 409 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.52□□□□□ -2.17
COL4A2P08572 SEM1P1-201ENST00000506694 209 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.52□□□□□ -2.17
COL4A2P08572 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A2P08572 RNU6-1256P-201ENST00000516539 103 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A2P08572 AP004607.1-201ENST00000524456 203 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.52□□□□□ -2.17
COL4A2P08572 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.52□□□□□ -2.17
COL4A2P08572 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A2P08572 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.52□□□□□ -2.17
COL4A2P08572 AC005498.1-201ENST00000592125 465 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AL157834.3-201ENST00000615543 103 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 MIR6779-201ENST00000617283 64 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AC109809.1-201ENST00000619665 545 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AC009268.2-201ENST00000621925 457 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AP000720.1-201ENST00000625091 483 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 LINC02211-204ENST00000642024 1070 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AL022578.1-201ENST00000439330 1433 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
COL4A2P08572 DDX10P1-201ENST00000448545 1933 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
COL4A2P08572 Y_RNA.112-201ENST00000363250 102 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 RNU6-359P-201ENST00000365466 108 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AL136310.1-201ENST00000404926 654 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AL030996.1-201ENST00000411430 235 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AC068533.2-201ENST00000411872 306 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 Z85995.1-201ENST00000415547 335 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 PPP1R11P2-201ENST00000423543 382 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AL451074.3-201ENST00000437709 472 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A2P08572 AL714022.1-201ENST00000439897 151 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 MTND5P14-201ENST00000441481 1267 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.52□□□□□ -2.17
COL4A2P08572 PPP1R2P5-201ENST00000457256 603 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.52□□□□□ -2.17
COL4A2P08572 AC116337.2-201ENST00000477662 156 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 RN7SL274P-201ENST00000492268 272 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 RPS27P26-201ENST00000494583 239 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 CDC42P4-201ENST00000510507 563 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 SNORA31.24-201ENST00000517232 57 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
COL4A2P08572 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.52□□□□□ -2.17
COL4A2P08572 FTX_3.1-201ENST00000610451 147 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AC004852.3-201ENST00000614131 326 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 AC090132.2-201ENST00000615881 347 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 RMST_2.1-201ENST00000617263 136 ntBASIC1.52□□□□□ -2.17
COL4A2P08572 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
COL4A2P08572 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.51□□□□□ -2.17
COL4A2P08572 AC006026.1-201ENST00000444025 1803 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.51□□□□□ -2.17
COL4A2P08572 AC008669.1-201ENST00000565823 2178 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
COL4A2P08572 MIR96-201ENST00000362288 78 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 Y_RNA.548-201ENST00000384656 105 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 MIR514A1-201ENST00000385133 98 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 MIR767-201ENST00000390228 109 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 RNU2-40P-201ENST00000410833 196 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 AC099548.1-201ENST00000421443 426 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A2P08572 IFNA20P-201ENST00000436840 528 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 DNAJC19P4-201ENST00000440115 345 ntBASIC1.51□□□□□ -2.17
COL4A2P08572 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.51□□□□□ -2.17
COL4A2P08572 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms