Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AL451064.1-201ENST00000607718 471 ntBASIC2.55□□□□□ -2
SFTPBP07988 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.55□□□□□ -2
SFTPBP07988 AL359198.2-201ENST00000611836 194 ntBASIC2.55□□□□□ -2
SFTPBP07988 AC107871.2-201ENST00000612894 502 ntBASIC2.55□□□□□ -2
SFTPBP07988 AC008250.2-201ENST00000615261 205 ntBASIC2.55□□□□□ -2
SFTPBP07988 AL603839.4-201ENST00000624658 1005 ntBASIC2.55□□□□□ -2
SFTPBP07988 AC019226.2-201ENST00000625973 424 ntBASIC2.55□□□□□ -2
SFTPBP07988 AL137003.2-201ENST00000606924 2538 ntBASIC2.54□□□□□ -2
SFTPBP07988 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.54□□□□□ -2
SFTPBP07988 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.54□□□□□ -2
SFTPBP07988 MIR22-201ENST00000362190 85 ntBASIC2.54□□□□□ -2
SFTPBP07988 RNY4P34-201ENST00000364779 95 ntBASIC2.54□□□□□ -2
SFTPBP07988 SNORA4.3-201ENST00000365564 137 ntBASIC2.54□□□□□ -2
SFTPBP07988 SNORA54-201ENST00000384281 123 ntBASIC2.54□□□□□ -2
SFTPBP07988 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.54□□□□□ -2
SFTPBP07988 RPL21P75-201ENST00000396599 483 ntBASIC2.54□□□□□ -2
SFTPBP07988 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
SFTPBP07988 RPL21P28-201ENST00000401418 483 ntBASIC2.54□□□□□ -2
SFTPBP07988 AL356057.2-201ENST00000403318 432 ntBASIC2.54□□□□□ -2
SFTPBP07988 AL592114.1-201ENST00000403842 483 ntBASIC2.54□□□□□ -2
SFTPBP07988 AL513475.1-201ENST00000406602 315 ntBASIC2.54□□□□□ -2
SFTPBP07988 SNORD88.1-201ENST00000408684 91 ntBASIC2.54□□□□□ -2
SFTPBP07988 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.54□□□□□ -2
SFTPBP07988 RNU6-195P-201ENST00000411352 109 ntBASIC2.54□□□□□ -2
SFTPBP07988 RPS3AP3-201ENST00000411933 242 ntBASIC2.54□□□□□ -2
SFTPBP07988 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.54□□□□□ -2
SFTPBP07988 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.54□□□□□ -2
SFTPBP07988 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.54□□□□□ -2
SFTPBP07988 RPL23AP30-201ENST00000432419 501 ntBASIC2.54□□□□□ -2
SFTPBP07988 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.54□□□□□ -2
SFTPBP07988 HMGN2P10-201ENST00000448085 265 ntBASIC2.54□□□□□ -2
SFTPBP07988 MTATP6P7-201ENST00000453315 681 ntBASIC2.54□□□□□ -2
SFTPBP07988 AC233279.1-201ENST00000455300 423 ntBASIC2.54□□□□□ -2
SFTPBP07988 RPL21P39-201ENST00000463605 483 ntBASIC2.54□□□□□ -2
SFTPBP07988 TRBV1-201ENST00000476502 284 ntBASIC2.54□□□□□ -2
SFTPBP07988 RPL21P93-201ENST00000480465 489 ntBASIC2.54□□□□□ -2
SFTPBP07988 AC087190.1-201ENST00000484462 480 ntBASIC2.54□□□□□ -2
SFTPBP07988 AC093591.1-201ENST00000491435 481 ntBASIC2.54□□□□□ -2
SFTPBP07988 RPL21P16-201ENST00000495531 483 ntBASIC2.54□□□□□ -2
SFTPBP07988 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.54□□□□□ -2
SFTPBP07988 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.54□□□□□ -2
SFTPBP07988 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.54□□□□□ -2
SFTPBP07988 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.54□□□□□ -2
SFTPBP07988 AC009902.1-201ENST00000519351 183 ntBASIC2.54□□□□□ -2
SFTPBP07988 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.54□□□□□ -2
SFTPBP07988 AC022616.3-201ENST00000523940 148 ntBASIC2.54□□□□□ -2
SFTPBP07988 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.54□□□□□ -2
SFTPBP07988 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.54□□□□□ -2
SFTPBP07988 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.54□□□□□ -2
SFTPBP07988 AC006199.1-201ENST00000548728 219 ntBASIC2.54□□□□□ -2
SFTPBP07988 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.54□□□□□ -2
SFTPBP07988 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.54□□□□□ -2
SFTPBP07988 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SFTPBP07988 MTCO3P13-201ENST00000577757 781 ntBASIC2.54□□□□□ -2
SFTPBP07988 AC005771.1-201ENST00000585581 349 ntBASIC2.54□□□□□ -2
SFTPBP07988 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.54□□□□□ -2
SFTPBP07988 AL161734.1-201ENST00000609720 557 ntBASIC2.54□□□□□ -2
SFTPBP07988 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.54□□□□□ -2
SFTPBP07988 MIR7106-201ENST00000612419 65 ntBASIC2.54□□□□□ -2
SFTPBP07988 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SFTPBP07988 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
SFTPBP07988 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SFTPBP07988 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SFTPBP07988 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.53□□□□□ -2
SFTPBP07988 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SFTPBP07988 U8.3-201ENST00000363321 132 ntBASIC2.53□□□□□ -2
SFTPBP07988 RNU6-461P-201ENST00000364195 107 ntBASIC2.53□□□□□ -2
SFTPBP07988 RN7SKP226-201ENST00000364912 300 ntBASIC2.53□□□□□ -2
SFTPBP07988 AF228730.1-201ENST00000397972 663 ntBASIC2.53□□□□□ -2
SFTPBP07988 RPS3AP36-201ENST00000398190 775 ntBASIC2.53□□□□□ -2
SFTPBP07988 AL512633.1-201ENST00000399931 655 ntBASIC2.53□□□□□ -2
SFTPBP07988 HMGN1P14-201ENST00000412459 517 ntBASIC2.53□□□□□ -2
SFTPBP07988 AC114491.1-201ENST00000416095 246 ntBASIC2.53□□□□□ -2
SFTPBP07988 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.53□□□□□ -2
SFTPBP07988 AC096649.2-201ENST00000416186 393 ntBASIC2.53□□□□□ -2
SFTPBP07988 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.53□□□□□ -2
SFTPBP07988 CETN4P-201ENST00000432407 469 ntBASIC2.53□□□□□ -2
SFTPBP07988 AL022238.1-201ENST00000442557 355 ntBASIC2.53□□□□□ -2
SFTPBP07988 BET1P1-201ENST00000482276 359 ntBASIC2.53□□□□□ -2
SFTPBP07988 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.53□□□□□ -2
SFTPBP07988 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.53□□□□□ -2
SFTPBP07988 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.53□□□□□ -2
SFTPBP07988 AC118465.1-201ENST00000513820 1271 ntBASIC2.53□□□□□ -2
SFTPBP07988 RN7SKP272-201ENST00000516988 232 ntBASIC2.53□□□□□ -2
SFTPBP07988 RNU6-1183P-201ENST00000517054 60 ntBASIC2.53□□□□□ -2
SFTPBP07988 AC025755.1-201ENST00000521306 278 ntBASIC2.53□□□□□ -2
SFTPBP07988 COX6CP5-201ENST00000527162 228 ntBASIC2.53□□□□□ -2
SFTPBP07988 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.53□□□□□ -2
SFTPBP07988 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.53□□□□□ -2
SFTPBP07988 EIF4BP1-201ENST00000554881 351 ntBASIC2.53□□□□□ -2
SFTPBP07988 AL121821.2-201ENST00000556081 394 ntBASIC2.53□□□□□ -2
SFTPBP07988 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SFTPBP07988 AC012414.6-201ENST00000568241 401 ntBASIC2.53□□□□□ -2
SFTPBP07988 MIR3167-201ENST00000579623 85 ntBASIC2.53□□□□□ -2
SFTPBP07988 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.53□□□□□ -2
SFTPBP07988 AC007938.3-201ENST00000604965 623 ntBASIC2.53□□□□□ -2
SFTPBP07988 MIR15A-201ENST00000607334 83 ntBASIC2.53□□□□□ -2
SFTPBP07988 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SFTPBP07988 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.53□□□□□ -2
SFTPBP07988 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms