Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.91□□□□□ -1.94
VTNP04004 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.91□□□□□ -1.94
VTNP04004 RPL30P14-201ENST00000482744 348 ntBASIC2.91□□□□□ -1.94
VTNP04004 SNORA31.1-201ENST00000515993 133 ntBASIC2.91□□□□□ -1.94
VTNP04004 SNORA31.5-201ENST00000516190 133 ntBASIC2.91□□□□□ -1.94
VTNP04004 RNU2-10P-201ENST00000516375 211 ntBASIC2.91□□□□□ -1.94
VTNP04004 SNORD59.2-201ENST00000516873 68 ntBASIC2.91□□□□□ -1.94
VTNP04004 MTCO2P4-201ENST00000517968 247 ntBASIC2.91□□□□□ -1.94
VTNP04004 HMGB1P41-201ENST00000520234 440 ntBASIC2.91□□□□□ -1.94
VTNP04004 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.91□□□□□ -1.94
VTNP04004 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.91□□□□□ -1.94
VTNP04004 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.91□□□□□ -1.94
VTNP04004 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.91□□□□□ -1.94
VTNP04004 AC093012.1-202ENST00000549403 582 ntBASIC2.91□□□□□ -1.94
VTNP04004 AL355836.1-201ENST00000555951 870 ntBASIC2.91□□□□□ -1.94
VTNP04004 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.91□□□□□ -1.94
VTNP04004 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.91□□□□□ -1.94
VTNP04004 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.91□□□□□ -1.94
VTNP04004 MIR4293-201ENST00000584305 78 ntBASIC2.91□□□□□ -1.94
VTNP04004 Z84480.1-201ENST00000605131 311 ntBASIC2.91□□□□□ -1.94
VTNP04004 AC004832.5-201ENST00000608677 401 ntBASIC2.91□□□□□ -1.94
VTNP04004 AC090132.2-201ENST00000615881 347 ntBASIC2.91□□□□□ -1.94
VTNP04004 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.91□□□□□ -1.94
VTNP04004 MIR4275-201ENST00000636486 87 ntBASIC2.91□□□□□ -1.94
VTNP04004 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VTNP04004 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VTNP04004 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.91□□□□□ -1.94
VTNP04004 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.9□□□□□ -1.94
VTNP04004 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
VTNP04004 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VTNP04004 Y_RNA.3-201ENST00000362331 103 ntBASIC2.9□□□□□ -1.95
VTNP04004 Y_RNA.41-201ENST00000362646 102 ntBASIC2.9□□□□□ -1.95
VTNP04004 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VTNP04004 DYNLT3P1-201ENST00000378574 347 ntBASIC2.9□□□□□ -1.95
VTNP04004 XGY1-201ENST00000381172 446 ntBASIC2.9□□□□□ -1.95
VTNP04004 AL512633.1-201ENST00000399931 655 ntBASIC2.9□□□□□ -1.95
VTNP04004 RNA5SP38-201ENST00000410750 119 ntBASIC2.9□□□□□ -1.95
VTNP04004 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.9□□□□□ -1.95
VTNP04004 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.9□□□□□ -1.95
VTNP04004 AC093106.2-201ENST00000428212 385 ntBASIC2.9□□□□□ -1.95
VTNP04004 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.9□□□□□ -1.95
VTNP04004 OR2B8P-201ENST00000432841 938 ntBASIC2.9□□□□□ -1.95
VTNP04004 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.9□□□□□ -1.95
VTNP04004 AL451074.3-201ENST00000437709 472 ntBASIC2.9□□□□□ -1.95
VTNP04004 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.9□□□□□ -1.95
VTNP04004 AC079448.1-201ENST00000449377 373 ntBASIC2.9□□□□□ -1.95
VTNP04004 C1DP4-201ENST00000455429 424 ntBASIC2.9□□□□□ -1.95
VTNP04004 RN7SL429P-201ENST00000479090 223 ntBASIC2.9□□□□□ -1.95
VTNP04004 RN7SL489P-201ENST00000486185 223 ntBASIC2.9□□□□□ -1.95
VTNP04004 RN7SL327P-201ENST00000488659 223 ntBASIC2.9□□□□□ -1.95
VTNP04004 SRIP1-201ENST00000489235 288 ntBASIC2.9□□□□□ -1.95
VTNP04004 AC107401.1-201ENST00000503426 685 ntBASIC2.9□□□□□ -1.95
VTNP04004 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
VTNP04004 CASP1P1-201ENST00000526345 212 ntBASIC2.9□□□□□ -1.95
VTNP04004 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.9□□□□□ -1.95
VTNP04004 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.9□□□□□ -1.95
VTNP04004 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.9□□□□□ -1.95
VTNP04004 AC027176.1-201ENST00000560204 514 ntBASIC2.9□□□□□ -1.95
VTNP04004 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.9□□□□□ -1.95
VTNP04004 AC068790.2-201ENST00000602601 557 ntBASIC2.9□□□□□ -1.95
VTNP04004 AC103710.2-201ENST00000609912 942 ntBASIC2.9□□□□□ -1.95
VTNP04004 AC013476.2-201ENST00000614456 459 ntBASIC2.9□□□□□ -1.95
VTNP04004 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.9□□□□□ -1.95
VTNP04004 RN7SL853P-201ENST00000617250 223 ntBASIC2.9□□□□□ -1.95
VTNP04004 AL589994.2-201ENST00000621124 579 ntBASIC2.9□□□□□ -1.95
VTNP04004 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
VTNP04004 OR5AK4P-201ENST00000635912 903 ntBASIC2.9□□□□□ -1.95
VTNP04004 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
VTNP04004 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VTNP04004 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VTNP04004 AL161431.1-201ENST00000618966 4205 ntBASIC2.9□□□□□ -1.95
VTNP04004 MTND5P26-201ENST00000426018 1752 ntBASIC2.89□□□□□ -1.95
VTNP04004 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VTNP04004 MAPK10-322ENST00000641485 4530 ntBASIC2.89□□□□□ -1.95
VTNP04004 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
VTNP04004 SNORD62.1-201ENST00000362541 86 ntBASIC2.89□□□□□ -1.95
VTNP04004 RNU6-169P-201ENST00000365336 107 ntBASIC2.89□□□□□ -1.95
VTNP04004 RNU6-282P-201ENST00000365357 103 ntBASIC2.89□□□□□ -1.95
VTNP04004 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.89□□□□□ -1.95
VTNP04004 RNU6-701P-201ENST00000384059 107 ntBASIC2.89□□□□□ -1.95
VTNP04004 RNU6-39P-201ENST00000384344 107 ntBASIC2.89□□□□□ -1.95
VTNP04004 RNU6-456P-201ENST00000384493 107 ntBASIC2.89□□□□□ -1.95
VTNP04004 MIR514A1-201ENST00000385133 98 ntBASIC2.89□□□□□ -1.95
VTNP04004 RNU6-1197P-201ENST00000391183 107 ntBASIC2.89□□□□□ -1.95
VTNP04004 GSTA9P-201ENST00000406231 611 ntBASIC2.89□□□□□ -1.95
VTNP04004 RN7SKP140-201ENST00000411196 284 ntBASIC2.89□□□□□ -1.95
VTNP04004 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.89□□□□□ -1.95
VTNP04004 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.89□□□□□ -1.95
VTNP04004 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.89□□□□□ -1.95
VTNP04004 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.89□□□□□ -1.95
VTNP04004 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.89□□□□□ -1.95
VTNP04004 SDAD1P2-201ENST00000441308 2028 ntBASIC2.89□□□□□ -1.95
VTNP04004 MTATP6P30-201ENST00000443540 664 ntBASIC2.89□□□□□ -1.95
VTNP04004 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.89□□□□□ -1.95
VTNP04004 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.89□□□□□ -1.95
VTNP04004 RPS20P20-201ENST00000460498 340 ntBASIC2.89□□□□□ -1.95
VTNP04004 MTCO2P29-201ENST00000465212 189 ntBASIC2.89□□□□□ -1.95
VTNP04004 AC105252.1-201ENST00000503089 286 ntBASIC2.89□□□□□ -1.95
VTNP04004 AC010493.1-201ENST00000513479 292 ntBASIC2.89□□□□□ -1.95
VTNP04004 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms