Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.72□□□□□ -2.13
APOEP02649 ZYG11AP1-201ENST00000430329 837 ntBASIC1.72□□□□□ -2.13
APOEP02649 SNRPEP9-201ENST00000436794 238 ntBASIC1.72□□□□□ -2.13
APOEP02649 RPL23AP3-201ENST00000453844 468 ntBASIC1.72□□□□□ -2.13
APOEP02649 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
APOEP02649 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.72□□□□□ -2.13
APOEP02649 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.72□□□□□ -2.13
APOEP02649 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.72□□□□□ -2.13
APOEP02649 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.72□□□□□ -2.13
APOEP02649 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.72□□□□□ -2.13
APOEP02649 MIR3126-201ENST00000577443 74 ntBASIC1.72□□□□□ -2.13
APOEP02649 MIR4299-201ENST00000577899 72 ntBASIC1.72□□□□□ -2.13
APOEP02649 AL357094.1-201ENST00000603845 844 ntBASIC1.72□□□□□ -2.13
APOEP02649 MIR8084-201ENST00000614105 89 ntBASIC1.72□□□□□ -2.13
APOEP02649 AC009233.1-201ENST00000616477 371 ntBASIC1.72□□□□□ -2.13
APOEP02649 U4atac.1-201ENST00000618345 95 ntBASIC1.72□□□□□ -2.13
APOEP02649 AC010975.3-201ENST00000618727 978 ntBASIC1.72□□□□□ -2.13
APOEP02649 U2.21-201ENST00000637295 81 ntBASIC1.72□□□□□ -2.13
APOEP02649 MKKS-204ENST00000639674 192 ntBASIC1.72□□□□□ -2.13
APOEP02649 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
APOEP02649 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.72□□□□□ -2.13
APOEP02649 MTND4P23-201ENST00000447723 1363 ntBASIC1.72□□□□□ -2.13
APOEP02649 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.71□□□□□ -2.14
APOEP02649 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
APOEP02649 ZNF876P-202ENST00000398732 1485 ntBASIC1.71□□□□□ -2.14
APOEP02649 Y_RNA.234-201ENST00000364409 97 ntBASIC1.71□□□□□ -2.14
APOEP02649 AL356432.1-201ENST00000405809 419 ntBASIC1.71□□□□□ -2.14
APOEP02649 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.71□□□□□ -2.14
APOEP02649 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.71□□□□□ -2.14
APOEP02649 AL358453.1-201ENST00000422522 250 ntBASIC1.71□□□□□ -2.14
APOEP02649 BX119904.4-201ENST00000424402 301 ntBASIC1.71□□□□□ -2.14
APOEP02649 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.71□□□□□ -2.14
APOEP02649 SNORD13-201ENST00000459299 104 ntBASIC1.71□□□□□ -2.14
APOEP02649 AC104685.1-201ENST00000502445 371 ntBASIC1.71□□□□□ -2.14
APOEP02649 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.71□□□□□ -2.14
APOEP02649 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.71□□□□□ -2.14
APOEP02649 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.71□□□□□ -2.14
APOEP02649 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.71□□□□□ -2.14
APOEP02649 MTCO2P15-201ENST00000532655 656 ntBASIC1.71□□□□□ -2.14
APOEP02649 AC124283.4-201ENST00000581815 456 ntBASIC1.71□□□□□ -2.14
APOEP02649 AC026741.1-201ENST00000605892 482 ntBASIC1.71□□□□□ -2.14
APOEP02649 AC010133.1-201ENST00000615809 842 ntBASIC1.71□□□□□ -2.14
APOEP02649 AL353997.5-201ENST00000618886 171 ntBASIC1.71□□□□□ -2.14
APOEP02649 AC024581.2-201ENST00000619986 252 ntBASIC1.71□□□□□ -2.14
APOEP02649 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.71□□□□□ -2.14
APOEP02649 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.71□□□□□ -2.14
APOEP02649 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
APOEP02649 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.71□□□□□ -2.14
APOEP02649 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
APOEP02649 U8.3-201ENST00000363321 132 ntBASIC1.7□□□□□ -2.14
APOEP02649 RNA5SP363-201ENST00000365072 115 ntBASIC1.7□□□□□ -2.14
APOEP02649 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.7□□□□□ -2.14
APOEP02649 RNU6-637P-201ENST00000384050 107 ntBASIC1.7□□□□□ -2.14
APOEP02649 AL356421.1-201ENST00000403255 413 ntBASIC1.7□□□□□ -2.14
APOEP02649 RPL7P27-201ENST00000403775 720 ntBASIC1.7□□□□□ -2.14
APOEP02649 AL161449.1-201ENST00000414531 1199 ntBASIC1.7□□□□□ -2.14
APOEP02649 MTCO2P5-201ENST00000422621 426 ntBASIC1.7□□□□□ -2.14
APOEP02649 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.7□□□□□ -2.14
APOEP02649 SEPT7P5-201ENST00000434048 306 ntBASIC1.7□□□□□ -2.14
APOEP02649 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.7□□□□□ -2.14
APOEP02649 SEPT14P24-201ENST00000447236 180 ntBASIC1.7□□□□□ -2.14
APOEP02649 SSXP1-201ENST00000453640 473 ntBASIC1.7□□□□□ -2.14
APOEP02649 SNORD121B-201ENST00000458838 81 ntBASIC1.7□□□□□ -2.14
APOEP02649 snoU109.1-201ENST00000459339 135 ntBASIC1.7□□□□□ -2.14
APOEP02649 AC087884.1-201ENST00000469738 328 ntBASIC1.7□□□□□ -2.14
APOEP02649 AC069528.1-202ENST00000482888 637 ntBASIC1.7□□□□□ -2.14
APOEP02649 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
APOEP02649 AL160314.1-201ENST00000490836 438 ntBASIC1.7□□□□□ -2.14
APOEP02649 RNA5SP290-201ENST00000517133 127 ntBASIC1.7□□□□□ -2.14
APOEP02649 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.7□□□□□ -2.14
APOEP02649 AC012435.1-202ENST00000568772 240 ntBASIC1.7□□□□□ -2.14
APOEP02649 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.7□□□□□ -2.14
APOEP02649 AL139344.1-201ENST00000605228 195 ntBASIC1.7□□□□□ -2.14
APOEP02649 AP003400.5-201ENST00000624827 617 ntBASIC1.7□□□□□ -2.14
APOEP02649 AC099063.3-201ENST00000642066 185 ntBASIC1.7□□□□□ -2.14
APOEP02649 AC006026.1-201ENST00000444025 1803 ntBASIC1.7□□□□□ -2.14
APOEP02649 AL359854.1-201ENST00000614203 1594 ntBASIC1.69□□□□□ -2.14
APOEP02649 RNU1-17P-201ENST00000363022 152 ntBASIC1.69□□□□□ -2.14
APOEP02649 RNU6-216P-201ENST00000363282 104 ntBASIC1.69□□□□□ -2.14
APOEP02649 RNU6-1078P-201ENST00000364522 103 ntBASIC1.69□□□□□ -2.14
APOEP02649 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
APOEP02649 RN7SKP101-201ENST00000411376 320 ntBASIC1.69□□□□□ -2.14
APOEP02649 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.69□□□□□ -2.14
APOEP02649 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.69□□□□□ -2.14
APOEP02649 AC010153.1-201ENST00000432862 727 ntBASIC1.69□□□□□ -2.14
APOEP02649 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.69□□□□□ -2.14
APOEP02649 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.69□□□□□ -2.14
APOEP02649 AC092902.1-201ENST00000486999 259 ntBASIC1.69□□□□□ -2.14
APOEP02649 AC055855.1-201ENST00000489563 579 ntBASIC1.69□□□□□ -2.14
APOEP02649 AC121161.1-201ENST00000510606 652 ntBASIC1.69□□□□□ -2.14
APOEP02649 AC107953.1-201ENST00000522216 297 ntBASIC1.69□□□□□ -2.14
APOEP02649 AC233702.2-202ENST00000562547 291 ntBASIC1.69□□□□□ -2.14
APOEP02649 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
APOEP02649 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.69□□□□□ -2.14
APOEP02649 MIR3167-201ENST00000579623 85 ntBASIC1.69□□□□□ -2.14
APOEP02649 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.69□□□□□ -2.14
APOEP02649 AC091152.3-201ENST00000604227 325 ntBASIC1.69□□□□□ -2.14
APOEP02649 AC239868.4-201ENST00000608318 671 ntBASIC1.69□□□□□ -2.14
APOEP02649 AC253576.2-201ENST00000618815 580 ntBASIC1.69□□□□□ -2.14
APOEP02649 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms