Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AL591719.1-201ENST00000444669 744 ntBASIC2.48□□□□□ -2.01
MBD3O95983 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.48□□□□□ -2.01
MBD3O95983 RPS3P1-201ENST00000456781 192 ntBASIC2.48□□□□□ -2.01
MBD3O95983 RNU7-26P-201ENST00000458980 63 ntBASIC2.48□□□□□ -2.01
MBD3O95983 TRBV1-201ENST00000476502 284 ntBASIC2.48□□□□□ -2.01
MBD3O95983 AC105252.1-201ENST00000503089 286 ntBASIC2.48□□□□□ -2.01
MBD3O95983 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
MBD3O95983 AC098591.2-201ENST00000510152 315 ntBASIC2.48□□□□□ -2.01
MBD3O95983 RNA5SP165-201ENST00000517142 115 ntBASIC2.48□□□□□ -2.01
MBD3O95983 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.48□□□□□ -2.01
MBD3O95983 AL356432.3-201ENST00000568952 465 ntBASIC2.48□□□□□ -2.01
MBD3O95983 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.48□□□□□ -2.01
MBD3O95983 AL451007.1-201ENST00000595491 289 ntBASIC2.48□□□□□ -2.01
MBD3O95983 AL391813.1-201ENST00000603098 260 ntBASIC2.48□□□□□ -2.01
MBD3O95983 AC018714.1-201ENST00000605028 208 ntBASIC2.48□□□□□ -2.01
MBD3O95983 AL160281.1-201ENST00000605307 311 ntBASIC2.48□□□□□ -2.01
MBD3O95983 AC027449.1-201ENST00000608890 407 ntBASIC2.48□□□□□ -2.01
MBD3O95983 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.48□□□□□ -2.01
MBD3O95983 MIR6817-201ENST00000615588 66 ntBASIC2.48□□□□□ -2.01
MBD3O95983 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.48□□□□□ -2.01
MBD3O95983 MIR6132-201ENST00000622083 109 ntBASIC2.48□□□□□ -2.01
MBD3O95983 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.48□□□□□ -2.01
MBD3O95983 AC007998.5-201ENST00000622938 237 ntBASIC2.48□□□□□ -2.01
MBD3O95983 AL136313.1-201ENST00000624804 202 ntBASIC2.48□□□□□ -2.01
MBD3O95983 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.48□□□□□ -2.01
MBD3O95983 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.48□□□□□ -2.01
MBD3O95983 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
MBD3O95983 AC010889.1-201ENST00000566193 2666 ntBASIC2.47□□□□□ -2.01
MBD3O95983 UBE2L2-201ENST00000254302 429 ntBASIC2.47□□□□□ -2.01
MBD3O95983 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
MBD3O95983 Y_RNA.46-201ENST00000362695 102 ntBASIC2.47□□□□□ -2.01
MBD3O95983 RNA5SP160-201ENST00000364866 120 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
MBD3O95983 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.47□□□□□ -2.01
MBD3O95983 MIR491-201ENST00000384877 84 ntBASIC2.47□□□□□ -2.01
MBD3O95983 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.47□□□□□ -2.01
MBD3O95983 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.47□□□□□ -2.01
MBD3O95983 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.47□□□□□ -2.01
MBD3O95983 AC107081.1-201ENST00000414975 361 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.47□□□□□ -2.01
MBD3O95983 BTF3L4P3-201ENST00000418879 476 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.47□□□□□ -2.01
MBD3O95983 AL353777.1-201ENST00000425552 326 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.47□□□□□ -2.01
MBD3O95983 AC104651.1-201ENST00000427559 735 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.47□□□□□ -2.01
MBD3O95983 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.47□□□□□ -2.01
MBD3O95983 SNORD97-201ENST00000459187 142 ntBASIC2.47□□□□□ -2.01
MBD3O95983 RNU1-103P-201ENST00000516502 125 ntBASIC2.47□□□□□ -2.01
MBD3O95983 MRPS36P3-201ENST00000519284 130 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.47□□□□□ -2.01
MBD3O95983 AP001372.4-201ENST00000524889 472 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AP006587.4-201ENST00000526053 529 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AP003461.1-201ENST00000528866 78 ntBASIC2.47□□□□□ -2.01
MBD3O95983 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.47□□□□□ -2.01
MBD3O95983 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.47□□□□□ -2.01
MBD3O95983 AC009097.3-201ENST00000563557 1018 ntBASIC2.47□□□□□ -2.01
MBD3O95983 MIR3146-201ENST00000580367 79 ntBASIC2.47□□□□□ -2.01
MBD3O95983 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.47□□□□□ -2.01
MBD3O95983 AL670379.6-201ENST00000603753 252 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AC009314.1-201ENST00000603871 304 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AL670379.11-201ENST00000604059 253 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AC008162.1-201ENST00000604718 254 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AL670379.1-201ENST00000604752 252 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AL670379.5-201ENST00000605253 252 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AL670379.12-201ENST00000605291 253 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AL670379.8-201ENST00000605353 252 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AL670379.7-201ENST00000605823 252 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AL589743.7-201ENST00000612637 233 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AL050303.3-201ENST00000613704 284 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.47□□□□□ -2.01
MBD3O95983 uc_338.12-201ENST00000616344 181 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AC021755.4-201ENST00000616620 456 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AL449363.1-201ENST00000617815 186 ntBASIC2.47□□□□□ -2.01
MBD3O95983 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.47□□□□□ -2.01
MBD3O95983 FRG1KP-201ENST00000623592 341 ntBASIC2.47□□□□□ -2.01
MBD3O95983 MIR3199-2-201ENST00000636243 86 ntBASIC2.47□□□□□ -2.01
MBD3O95983 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
MBD3O95983 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
MBD3O95983 MTND4P16-201ENST00000466108 1367 ntBASIC2.47□□□□□ -2.01
MBD3O95983 AL365361.1-201ENST00000566942 3481 ntBASIC2.46□□□□□ -2.02
MBD3O95983 RNU6-1083P-201ENST00000384022 107 ntBASIC2.46□□□□□ -2.02
MBD3O95983 RNU6-14P-201ENST00000384630 106 ntBASIC2.46□□□□□ -2.02
MBD3O95983 MIR196B-201ENST00000384852 84 ntBASIC2.46□□□□□ -2.02
MBD3O95983 MIR221-201ENST00000385135 110 ntBASIC2.46□□□□□ -2.02
MBD3O95983 RNU6-817P-201ENST00000391083 104 ntBASIC2.46□□□□□ -2.02
MBD3O95983 AC098592.1-201ENST00000419352 333 ntBASIC2.46□□□□□ -2.02
MBD3O95983 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.46□□□□□ -2.02
MBD3O95983 RPS27AP14-201ENST00000422868 454 ntBASIC2.46□□□□□ -2.02
MBD3O95983 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.46□□□□□ -2.02
MBD3O95983 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.46□□□□□ -2.02
MBD3O95983 SRIP2-201ENST00000428470 166 ntBASIC2.46□□□□□ -2.02
MBD3O95983 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.46□□□□□ -2.02
MBD3O95983 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.46□□□□□ -2.02
MBD3O95983 RPL37P21-201ENST00000435890 276 ntBASIC2.46□□□□□ -2.02
MBD3O95983 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.46□□□□□ -2.02
MBD3O95983 AL831737.1-201ENST00000441288 271 ntBASIC2.46□□□□□ -2.02
MBD3O95983 HMGN2P10-201ENST00000448085 265 ntBASIC2.46□□□□□ -2.02
MBD3O95983 AL118520.1-201ENST00000450770 291 ntBASIC2.46□□□□□ -2.02
MBD3O95983 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms