Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 GPM6BP2-201ENST00000432046 144 ntBASIC1.91□□□□□ -2.1
VAPBO95292 RPL36AP53-201ENST00000432891 316 ntBASIC1.91□□□□□ -2.1
VAPBO95292 UBE2FP3-201ENST00000436366 524 ntBASIC1.91□□□□□ -2.1
VAPBO95292 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.91□□□□□ -2.1
VAPBO95292 GPM6BP1-201ENST00000446387 144 ntBASIC1.91□□□□□ -2.1
VAPBO95292 AC020550.1-201ENST00000447385 163 ntBASIC1.91□□□□□ -2.1
VAPBO95292 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.91□□□□□ -2.1
VAPBO95292 AC005410.1-202ENST00000460347 485 ntBASIC1.91□□□□□ -2.1
VAPBO95292 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.91□□□□□ -2.1
VAPBO95292 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.91□□□□□ -2.1
VAPBO95292 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.91□□□□□ -2.1
VAPBO95292 DEFB131D-201ENST00000526803 184 ntBASIC1.91□□□□□ -2.1
VAPBO95292 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.91□□□□□ -2.1
VAPBO95292 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.91□□□□□ -2.1
VAPBO95292 MIR3126-201ENST00000577443 74 ntBASIC1.91□□□□□ -2.1
VAPBO95292 MIR4529-201ENST00000578110 78 ntBASIC1.91□□□□□ -2.1
VAPBO95292 MIR4287-201ENST00000579398 78 ntBASIC1.91□□□□□ -2.1
VAPBO95292 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.91□□□□□ -2.1
VAPBO95292 AP001486.3-201ENST00000615334 372 ntBASIC1.91□□□□□ -2.1
VAPBO95292 SDR42E1P4-201ENST00000620894 481 ntBASIC1.91□□□□□ -2.1
VAPBO95292 AP003400.5-201ENST00000624827 617 ntBASIC1.91□□□□□ -2.1
VAPBO95292 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VAPBO95292 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.91□□□□□ -2.1
VAPBO95292 AC011477.1-204ENST00000623416 1325 ntBASIC1.91□□□□□ -2.1
VAPBO95292 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
VAPBO95292 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.9□□□□□ -2.11
VAPBO95292 Y_RNA.408-201ENST00000383987 102 ntBASIC1.9□□□□□ -2.11
VAPBO95292 RNU6-658P-201ENST00000384606 106 ntBASIC1.9□□□□□ -2.11
VAPBO95292 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.9□□□□□ -2.11
VAPBO95292 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.9□□□□□ -2.11
VAPBO95292 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.9□□□□□ -2.11
VAPBO95292 PTGES3P4-201ENST00000426243 356 ntBASIC1.9□□□□□ -2.11
VAPBO95292 GTF2IP3-201ENST00000433887 494 ntBASIC1.9□□□□□ -2.11
VAPBO95292 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.9□□□□□ -2.11
VAPBO95292 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.9□□□□□ -2.11
VAPBO95292 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.9□□□□□ -2.11
VAPBO95292 PAXBP1P1-201ENST00000449315 447 ntBASIC1.9□□□□□ -2.11
VAPBO95292 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.9□□□□□ -2.11
VAPBO95292 MEMO1P3-201ENST00000459811 302 ntBASIC1.9□□□□□ -2.11
VAPBO95292 AC055731.1-201ENST00000474387 401 ntBASIC1.9□□□□□ -2.11
VAPBO95292 AC113347.3-201ENST00000509113 148 ntBASIC1.9□□□□□ -2.11
VAPBO95292 AC093809.1-201ENST00000509155 340 ntBASIC1.9□□□□□ -2.11
VAPBO95292 MRPS33P3-201ENST00000513456 322 ntBASIC1.9□□□□□ -2.11
VAPBO95292 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.9□□□□□ -2.11
VAPBO95292 HSPE1P18-201ENST00000517602 280 ntBASIC1.9□□□□□ -2.11
VAPBO95292 AL121821.2-201ENST00000556081 394 ntBASIC1.9□□□□□ -2.11
VAPBO95292 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.9□□□□□ -2.11
VAPBO95292 AC008749.1-201ENST00000597650 306 ntBASIC1.9□□□□□ -2.11
VAPBO95292 AC091152.3-201ENST00000604227 325 ntBASIC1.9□□□□□ -2.11
VAPBO95292 AL138963.2-201ENST00000605137 226 ntBASIC1.9□□□□□ -2.11
VAPBO95292 AL121652.1-201ENST00000608851 448 ntBASIC1.9□□□□□ -2.11
VAPBO95292 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.9□□□□□ -2.11
VAPBO95292 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
VAPBO95292 CENPCP1-201ENST00000533085 2578 ntBASIC1.9□□□□□ -2.11
VAPBO95292 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
VAPBO95292 KPNA2P1-201ENST00000458289 1591 ntBASIC1.89□□□□□ -2.11
VAPBO95292 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.89□□□□□ -2.11
VAPBO95292 RNU6-253P-201ENST00000384730 105 ntBASIC1.89□□□□□ -2.11
VAPBO95292 MIR1302-8-201ENST00000408342 128 ntBASIC1.89□□□□□ -2.11
VAPBO95292 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
VAPBO95292 RN7SKP192-201ENST00000411291 327 ntBASIC1.89□□□□□ -2.11
VAPBO95292 RPL21P24-201ENST00000413752 448 ntBASIC1.89□□□□□ -2.11
VAPBO95292 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.89□□□□□ -2.11
VAPBO95292 AC244035.1-201ENST00000430042 390 ntBASIC1.89□□□□□ -2.11
VAPBO95292 MTCO2P25-201ENST00000447065 681 ntBASIC1.89□□□□□ -2.11
VAPBO95292 TPT1P14-201ENST00000448018 505 ntBASIC1.89□□□□□ -2.11
VAPBO95292 AP001324.2-201ENST00000461163 319 ntBASIC1.89□□□□□ -2.11
VAPBO95292 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.89□□□□□ -2.11
VAPBO95292 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
VAPBO95292 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.89□□□□□ -2.11
VAPBO95292 AC096571.1-202ENST00000506634 735 ntBASIC1.89□□□□□ -2.11
VAPBO95292 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.89□□□□□ -2.11
VAPBO95292 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.89□□□□□ -2.11
VAPBO95292 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.89□□□□□ -2.11
VAPBO95292 RNU2-19P-201ENST00000517288 84 ntBASIC1.89□□□□□ -2.11
VAPBO95292 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.89□□□□□ -2.11
VAPBO95292 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.89□□□□□ -2.11
VAPBO95292 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.89□□□□□ -2.11
VAPBO95292 AC093012.1-202ENST00000549403 582 ntBASIC1.89□□□□□ -2.11
VAPBO95292 MIR4648-201ENST00000580107 72 ntBASIC1.89□□□□□ -2.11
VAPBO95292 AC104985.3-201ENST00000623479 597 ntBASIC1.89□□□□□ -2.11
VAPBO95292 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VAPBO95292 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VAPBO95292 U8.2-201ENST00000363156 134 ntBASIC1.88□□□□□ -2.11
VAPBO95292 RNA5SP88-201ENST00000365560 109 ntBASIC1.88□□□□□ -2.11
VAPBO95292 USP9YP26-201ENST00000421008 661 ntBASIC1.88□□□□□ -2.11
VAPBO95292 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.88□□□□□ -2.11
VAPBO95292 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.88□□□□□ -2.11
VAPBO95292 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.88□□□□□ -2.11
VAPBO95292 AL451074.3-201ENST00000437709 472 ntBASIC1.88□□□□□ -2.11
VAPBO95292 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.88□□□□□ -2.11
VAPBO95292 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.88□□□□□ -2.11
VAPBO95292 RPL21P134-201ENST00000453468 483 ntBASIC1.88□□□□□ -2.11
VAPBO95292 SNORA59A-201ENST00000459326 152 ntBASIC1.88□□□□□ -2.11
VAPBO95292 AC107032.1-201ENST00000485945 480 ntBASIC1.88□□□□□ -2.11
VAPBO95292 SNORA31.25-201ENST00000517242 134 ntBASIC1.88□□□□□ -2.11
VAPBO95292 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.88□□□□□ -2.11
VAPBO95292 OR5AQ1P-201ENST00000527596 927 ntBASIC1.88□□□□□ -2.11
VAPBO95292 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.88□□□□□ -2.11
VAPBO95292 AC022662.1-201ENST00000580252 331 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms