Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AL591704.1-201ENST00000432574 275 ntBASIC3.3□□□□□ -1.88
RTN3O95197 RPL37P4-201ENST00000448908 268 ntBASIC3.3□□□□□ -1.88
RTN3O95197 AC079448.1-201ENST00000449377 373 ntBASIC3.3□□□□□ -1.88
RTN3O95197 RPL36AP51-201ENST00000487216 318 ntBASIC3.3□□□□□ -1.88
RTN3O95197 RPS15AP34-201ENST00000487776 387 ntBASIC3.3□□□□□ -1.88
RTN3O95197 AC105252.1-201ENST00000503089 286 ntBASIC3.3□□□□□ -1.88
RTN3O95197 AC108078.2-201ENST00000510750 236 ntBASIC3.3□□□□□ -1.88
RTN3O95197 RN7SKP298-201ENST00000515950 94 ntBASIC3.3□□□□□ -1.88
RTN3O95197 Y_RNA.689-201ENST00000516589 107 ntBASIC3.3□□□□□ -1.88
RTN3O95197 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.3□□□□□ -1.88
RTN3O95197 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.3□□□□□ -1.88
RTN3O95197 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RTN3O95197 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.3□□□□□ -1.88
RTN3O95197 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.3□□□□□ -1.88
RTN3O95197 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.3□□□□□ -1.88
RTN3O95197 AL391840.1-201ENST00000571144 367 ntBASIC3.3□□□□□ -1.88
RTN3O95197 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.3□□□□□ -1.88
RTN3O95197 UBL5P2-201ENST00000583788 219 ntBASIC3.3□□□□□ -1.88
RTN3O95197 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.3□□□□□ -1.88
RTN3O95197 MTND4LP5-201ENST00000605152 292 ntBASIC3.3□□□□□ -1.88
RTN3O95197 AL162274.2-201ENST00000614406 332 ntBASIC3.3□□□□□ -1.88
RTN3O95197 AC099842.1-201ENST00000619919 596 ntBASIC3.3□□□□□ -1.88
RTN3O95197 AC110079.1-202ENST00000635213 138 ntBASIC3.3□□□□□ -1.88
RTN3O95197 AL512643.1-201ENST00000635735 524 ntBASIC3.3□□□□□ -1.88
RTN3O95197 Z99571.1-201ENST00000636677 394 ntBASIC3.3□□□□□ -1.88
RTN3O95197 U2.21-201ENST00000637295 81 ntBASIC3.3□□□□□ -1.88
RTN3O95197 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.3□□□□□ -1.88
RTN3O95197 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.3□□□□□ -1.88
RTN3O95197 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.29□□□□□ -1.88
RTN3O95197 RNU6-1097P-201ENST00000363586 107 ntBASIC3.29□□□□□ -1.88
RTN3O95197 Y_RNA.359-201ENST00000365498 102 ntBASIC3.29□□□□□ -1.88
RTN3O95197 RNU1-73P-201ENST00000383971 164 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.29□□□□□ -1.88
RTN3O95197 DEFB108C-201ENST00000400154 252 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AL138885.1-201ENST00000405921 675 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AC096664.2-201ENST00000411843 406 ntBASIC3.29□□□□□ -1.88
RTN3O95197 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.29□□□□□ -1.88
RTN3O95197 BTF3L4P1-201ENST00000413813 468 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.29□□□□□ -1.88
RTN3O95197 AC092809.3-201ENST00000415453 231 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AC114491.1-201ENST00000416095 246 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.29□□□□□ -1.88
RTN3O95197 RPS20P5-201ENST00000434808 360 ntBASIC3.29□□□□□ -1.88
RTN3O95197 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.29□□□□□ -1.88
RTN3O95197 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTN3O95197 MTCYBP1-201ENST00000454315 1119 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.29□□□□□ -1.88
RTN3O95197 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.29□□□□□ -1.88
RTN3O95197 RPS29P12-201ENST00000460178 152 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AC126389.1-201ENST00000477436 290 ntBASIC3.29□□□□□ -1.88
RTN3O95197 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTN3O95197 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.29□□□□□ -1.88
RTN3O95197 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.29□□□□□ -1.88
RTN3O95197 RNA5SP341-201ENST00000516261 117 ntBASIC3.29□□□□□ -1.88
RTN3O95197 RNU6-914P-201ENST00000516749 109 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.29□□□□□ -1.88
RTN3O95197 PSMA2P1-201ENST00000526365 646 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AP002404.1-201ENST00000532005 451 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AC024909.2-201ENST00000553035 286 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.29□□□□□ -1.88
RTN3O95197 AC027807.1-201ENST00000559921 996 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.29□□□□□ -1.88
RTN3O95197 AC073648.5-201ENST00000603502 305 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AL121992.2-201ENST00000606262 256 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AL589743.7-201ENST00000612637 233 ntBASIC3.29□□□□□ -1.88
RTN3O95197 AC092656.1-203ENST00000624134 423 ntBASIC3.29□□□□□ -1.88
RTN3O95197 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RTN3O95197 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
RTN3O95197 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.29□□□□□ -1.88
RTN3O95197 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTN3O95197 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTN3O95197 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RTN3O95197 RNU6-778P-201ENST00000363269 103 ntBASIC3.28□□□□□ -1.88
RTN3O95197 RNU4-40P-201ENST00000364351 143 ntBASIC3.28□□□□□ -1.88
RTN3O95197 RNU6-1119P-201ENST00000384349 108 ntBASIC3.28□□□□□ -1.88
RTN3O95197 SNORA24.1-201ENST00000384401 135 ntBASIC3.28□□□□□ -1.88
RTN3O95197 MIR128-1-201ENST00000384921 82 ntBASIC3.28□□□□□ -1.88
RTN3O95197 MIR767-201ENST00000390228 109 ntBASIC3.28□□□□□ -1.88
RTN3O95197 RNA5SP354-201ENST00000391247 136 ntBASIC3.28□□□□□ -1.88
RTN3O95197 SKA2P1-201ENST00000425592 390 ntBASIC3.28□□□□□ -1.88
RTN3O95197 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.28□□□□□ -1.88
RTN3O95197 AL049873.1-201ENST00000480540 376 ntBASIC3.28□□□□□ -1.88
RTN3O95197 AC116562.3-201ENST00000506136 177 ntBASIC3.28□□□□□ -1.88
RTN3O95197 AC109927.2-201ENST00000506416 303 ntBASIC3.28□□□□□ -1.88
RTN3O95197 RAC1P5-201ENST00000512182 576 ntBASIC3.28□□□□□ -1.88
RTN3O95197 AC022634.1-201ENST00000520765 532 ntBASIC3.28□□□□□ -1.88
RTN3O95197 SUB1P1-201ENST00000524415 382 ntBASIC3.28□□□□□ -1.88
RTN3O95197 AP003122.3-201ENST00000526316 255 ntBASIC3.28□□□□□ -1.88
RTN3O95197 AC068587.5-201ENST00000528506 175 ntBASIC3.28□□□□□ -1.88
RTN3O95197 AC084851.1-201ENST00000529105 249 ntBASIC3.28□□□□□ -1.88
RTN3O95197 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.28□□□□□ -1.88
RTN3O95197 ADI1P3-201ENST00000549509 470 ntBASIC3.28□□□□□ -1.88
RTN3O95197 H3F3AP1-201ENST00000559984 334 ntBASIC3.28□□□□□ -1.88
RTN3O95197 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RTN3O95197 AC024619.4-201ENST00000580924 316 ntBASIC3.28□□□□□ -1.88
RTN3O95197 MIR3124-201ENST00000582636 67 ntBASIC3.28□□□□□ -1.88
RTN3O95197 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.28□□□□□ -1.88
RTN3O95197 AL139286.2-201ENST00000606838 396 ntBASIC3.28□□□□□ -1.88
RTN3O95197 AL591516.1-201ENST00000611326 274 ntBASIC3.28□□□□□ -1.88
RTN3O95197 AC012409.4-201ENST00000612923 249 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms