Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AL139811.1-201ENST00000424779 2299 ntBASIC5.33□□□□□ -1.56
PTCD1O75127 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCD1O75127 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCD1O75127 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PTCD1O75127 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCD1O75127 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTCD1O75127 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
PTCD1O75127 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCD1O75127 AP001284.1-201ENST00000528393 2118 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
PTCD1O75127 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCD1O75127 Y_RNA.180-201ENST00000363867 113 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 RNU6-512P-201ENST00000364438 103 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 RNU6-200P-201ENST00000364743 107 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCD1O75127 Y_RNA.562-201ENST00000384695 113 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 AL158071.1-201ENST00000430315 461 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 HSPD1P21-201ENST00000436541 245 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCD1O75127 RANP8-201ENST00000444720 713 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.32□□□□□ -1.56
PTCD1O75127 PRELID3BP1-201ENST00000457142 540 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 AL591473.1-201ENST00000464297 313 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 SUMO2P6-201ENST00000505273 288 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 AC105758.1-201ENST00000506038 399 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 RNU6-111P-201ENST00000517179 105 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 LRRC37A5P-203ENST00000580181 585 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.32□□□□□ -1.56
PTCD1O75127 AC002545.1-201ENST00000592511 181 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.32□□□□□ -1.56
PTCD1O75127 FTX_2.1-201ENST00000618816 94 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PTCD1O75127 AL354798.1-201ENST00000622505 329 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.32□□□□□ -1.56
PTCD1O75127 AL606534.2-204ENST00000635008 178 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 MIR6715B-201ENST00000637172 77 ntBASIC5.32□□□□□ -1.56
PTCD1O75127 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCD1O75127 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PTCD1O75127 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTCD1O75127 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTCD1O75127 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTCD1O75127 AC022893.2-201ENST00000564832 3296 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 MAPK10-286ENST00000641208 8747 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTCD1O75127 AC005183.1-201ENST00000603687 1979 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTCD1O75127 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTCD1O75127 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PTCD1O75127 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PTCD1O75127 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTCD1O75127 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCD1O75127 SNORA20.1-201ENST00000364790 130 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 RNU6-806P-201ENST00000365147 105 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 RNU6-746P-201ENST00000384112 109 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 RNU6-607P-201ENST00000411283 108 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 AL513331.1-201ENST00000411908 397 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 AP000275.1-201ENST00000411943 390 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.31□□□□□ -1.56
PTCD1O75127 BX276092.3-201ENST00000424182 230 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 AL133396.1-201ENST00000432048 687 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.31□□□□□ -1.56
PTCD1O75127 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.31□□□□□ -1.56
PTCD1O75127 AC112492.4-201ENST00000456549 352 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 AC114801.2-201ENST00000503825 781 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 MLLT10P2-201ENST00000506434 249 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 AC008716.1-201ENST00000511084 513 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 APOOP4-201ENST00000513530 597 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 RNA5SP471-201ENST00000516971 106 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCD1O75127 FAM60BP-201ENST00000578364 658 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCD1O75127 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.31□□□□□ -1.56
PTCD1O75127 AC126323.6-202ENST00000568092 3511 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTCD1O75127 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PTCD1O75127 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.31□□□□□ -1.56
PTCD1O75127 MTND5P6-201ENST00000422338 1798 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.31□□□□□ -1.56
PTCD1O75127 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.31□□□□□ -1.56
PTCD1O75127 AL592437.2-201ENST00000421655 2434 ntBASIC5.31□□□□□ -1.56
PTCD1O75127 MAPK10-320ENST00000641462 6696 ntBASIC5.3□□□□□ -1.56
PTCD1O75127 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTCD1O75127 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTCD1O75127 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PTCD1O75127 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PTCD1O75127 RNU6-173P-201ENST00000364215 104 ntBASIC5.3□□□□□ -1.56
PTCD1O75127 SNORA73.2-201ENST00000364946 201 ntBASIC5.3□□□□□ -1.56
PTCD1O75127 Y_RNA.324-201ENST00000365165 102 ntBASIC5.3□□□□□ -1.56
PTCD1O75127 RNA5SP235-201ENST00000365411 114 ntBASIC5.3□□□□□ -1.56
PTCD1O75127 Y_RNA.376-201ENST00000365638 108 ntBASIC5.3□□□□□ -1.56
PTCD1O75127 Y_RNA.462-201ENST00000384268 102 ntBASIC5.3□□□□□ -1.56
PTCD1O75127 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PTCD1O75127 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.3□□□□□ -1.56
PTCD1O75127 MTCO1P39-201ENST00000426148 480 ntBASIC5.3□□□□□ -1.56
PTCD1O75127 AL353997.1-201ENST00000432936 108 ntBASIC5.3□□□□□ -1.56
PTCD1O75127 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.3□□□□□ -1.56
PTCD1O75127 IGHV3-76-201ENST00000522465 295 ntBASIC5.3□□□□□ -1.56
PTCD1O75127 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.3□□□□□ -1.56
PTCD1O75127 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.3□□□□□ -1.56
PTCD1O75127 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms