Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 Y_RNA.287-201ENST00000364853 94 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 Y_RNA.323-201ENST00000365157 109 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 Y_RNA.333-201ENST00000365274 102 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 Y_RNA.342-201ENST00000365352 113 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 AC007161.1-204ENST00000423039 460 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.16□□□□□ -1.58
GFRA3O60609 KRT8P51-201ENST00000438938 274 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 H3F3BP1-201ENST00000440551 403 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 RNU6-625P-201ENST00000459412 107 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 AC107297.1-201ENST00000459991 176 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 AC010265.1-201ENST00000513509 211 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 RNU6-377P-201ENST00000515965 102 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 RNU6-436P-201ENST00000516171 114 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.16□□□□□ -1.58
GFRA3O60609 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.16□□□□□ -1.58
GFRA3O60609 AC018448.1-201ENST00000552843 316 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.16□□□□□ -1.58
GFRA3O60609 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.16□□□□□ -1.58
GFRA3O60609 MIR3939-201ENST00000582614 106 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 AC024220.1-201ENST00000603675 484 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 SNRPGP20-201ENST00000604477 205 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 AC006133.1-201ENST00000617106 264 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 ZYXP1-201ENST00000617638 118 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.16□□□□□ -1.58
GFRA3O60609 MIR2052-201ENST00000636055 55 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA3O60609 AC097461.1-201ENST00000568928 2821 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA3O60609 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA3O60609 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA3O60609 Z73965.1-201ENST00000623412 2297 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA3O60609 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.16□□□□□ -1.58
GFRA3O60609 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
GFRA3O60609 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.15□□□□□ -1.58
GFRA3O60609 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
GFRA3O60609 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.15□□□□□ -1.58
GFRA3O60609 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
GFRA3O60609 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
GFRA3O60609 AC144833.1-201ENST00000567953 4089 ntBASIC5.15□□□□□ -1.58
GFRA3O60609 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
GFRA3O60609 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
GFRA3O60609 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
GFRA3O60609 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
GFRA3O60609 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
GFRA3O60609 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
GFRA3O60609 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
GFRA3O60609 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
GFRA3O60609 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
GFRA3O60609 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
GFRA3O60609 SNORD14B-201ENST00000364533 90 ntBASIC5.15□□□□□ -1.59
GFRA3O60609 RNU6-24P-201ENST00000384440 107 ntBASIC5.15□□□□□ -1.59
GFRA3O60609 AC138623.1-201ENST00000418060 216 ntBASIC5.15□□□□□ -1.59
GFRA3O60609 RPL30P3-201ENST00000424262 333 ntBASIC5.15□□□□□ -1.59
GFRA3O60609 AL732292.1-201ENST00000426692 226 ntBASIC5.15□□□□□ -1.59
GFRA3O60609 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.15□□□□□ -1.59
GFRA3O60609 RPL34P20-201ENST00000442771 351 ntBASIC5.15□□□□□ -1.59
GFRA3O60609 AL358232.1-201ENST00000448030 501 ntBASIC5.15□□□□□ -1.59
GFRA3O60609 Y_RNA.690-201ENST00000516603 95 ntBASIC5.15□□□□□ -1.59
GFRA3O60609 MIR2116-201ENST00000517221 80 ntBASIC5.15□□□□□ -1.59
GFRA3O60609 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.15□□□□□ -1.59
GFRA3O60609 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.15□□□□□ -1.59
GFRA3O60609 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.15□□□□□ -1.59
GFRA3O60609 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
GFRA3O60609 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
GFRA3O60609 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.15□□□□□ -1.59
GFRA3O60609 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.15□□□□□ -1.59
GFRA3O60609 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
GFRA3O60609 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
GFRA3O60609 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.15□□□□□ -1.59
GFRA3O60609 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
GFRA3O60609 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
GFRA3O60609 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
GFRA3O60609 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
GFRA3O60609 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GFRA3O60609 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GFRA3O60609 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.14□□□□□ -1.59
GFRA3O60609 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.14□□□□□ -1.59
GFRA3O60609 AL359693.1-201ENST00000614959 2407 ntBASIC5.14□□□□□ -1.59
GFRA3O60609 AP001284.1-201ENST00000528393 2118 ntBASIC5.14□□□□□ -1.59
GFRA3O60609 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
GFRA3O60609 MFSD8-239ENST00000641590 2479 ntBASIC5.14□□□□□ -1.59
GFRA3O60609 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
GFRA3O60609 Y_RNA.33-201ENST00000362591 102 ntBASIC5.14□□□□□ -1.59
GFRA3O60609 RNA5SP447-201ENST00000363749 119 ntBASIC5.14□□□□□ -1.59
GFRA3O60609 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
GFRA3O60609 SNORA72.4-201ENST00000384174 132 ntBASIC5.14□□□□□ -1.59
GFRA3O60609 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
GFRA3O60609 KNOP1P3-201ENST00000446933 426 ntBASIC5.14□□□□□ -1.59
GFRA3O60609 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.14□□□□□ -1.59
GFRA3O60609 IGKV1-22-201ENST00000524313 326 ntBASIC5.14□□□□□ -1.59
GFRA3O60609 AC137627.1-201ENST00000545761 289 ntBASIC5.14□□□□□ -1.59
GFRA3O60609 AC016256.1-201ENST00000547971 354 ntBASIC5.14□□□□□ -1.59
GFRA3O60609 MIR378D2-201ENST00000580636 98 ntBASIC5.14□□□□□ -1.59
GFRA3O60609 RN7SL690P-201ENST00000582087 240 ntBASIC5.14□□□□□ -1.59
GFRA3O60609 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.14□□□□□ -1.59
GFRA3O60609 AC123786.2-201ENST00000603459 275 ntBASIC5.14□□□□□ -1.59
GFRA3O60609 Y_RNA.818-201ENST00000618813 71 ntBASIC5.14□□□□□ -1.59
GFRA3O60609 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.14□□□□□ -1.59
GFRA3O60609 AC018529.3-201ENST00000624212 2254 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms