Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.76□□□□□ -2.13
SGCEO43556 ANXA2P1-201ENST00000505539 926 ntBASIC1.76□□□□□ -2.13
SGCEO43556 AC096571.1-202ENST00000506634 735 ntBASIC1.76□□□□□ -2.13
SGCEO43556 MTCO3P27-201ENST00000514397 196 ntBASIC1.76□□□□□ -2.13
SGCEO43556 RNA5SP137-201ENST00000516833 135 ntBASIC1.76□□□□□ -2.13
SGCEO43556 RNU6-703P-201ENST00000516946 107 ntBASIC1.76□□□□□ -2.13
SGCEO43556 RNU6-1028P-201ENST00000517164 93 ntBASIC1.76□□□□□ -2.13
SGCEO43556 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.76□□□□□ -2.13
SGCEO43556 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.76□□□□□ -2.13
SGCEO43556 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.76□□□□□ -2.13
SGCEO43556 ROCK1P1-201ENST00000573767 549 ntBASIC1.76□□□□□ -2.13
SGCEO43556 AC005034.5-201ENST00000604219 466 ntBASIC1.76□□□□□ -2.13
SGCEO43556 AP002802.2-201ENST00000605877 235 ntBASIC1.76□□□□□ -2.13
SGCEO43556 AF129408.1-201ENST00000608767 431 ntBASIC1.76□□□□□ -2.13
SGCEO43556 Y_RNA.783-201ENST00000613546 102 ntBASIC1.76□□□□□ -2.13
SGCEO43556 AL136981.2-201ENST00000617319 734 ntBASIC1.76□□□□□ -2.13
SGCEO43556 DUXAP9-208ENST00000622815 614 ntBASIC1.76□□□□□ -2.13
SGCEO43556 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.76□□□□□ -2.13
SGCEO43556 AL390862.1-201ENST00000635467 1469 ntBASIC1.75□□□□□ -2.13
SGCEO43556 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
SGCEO43556 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SGCEO43556 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.75□□□□□ -2.13
SGCEO43556 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
SGCEO43556 Y_RNA.578-201ENST00000390903 88 ntBASIC1.75□□□□□ -2.13
SGCEO43556 NDUFS5P1-201ENST00000405668 289 ntBASIC1.75□□□□□ -2.13
SGCEO43556 SUMO2P12-201ENST00000405924 140 ntBASIC1.75□□□□□ -2.13
SGCEO43556 GSTA9P-201ENST00000406231 611 ntBASIC1.75□□□□□ -2.13
SGCEO43556 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.75□□□□□ -2.13
SGCEO43556 MIR1302-8-201ENST00000408342 128 ntBASIC1.75□□□□□ -2.13
SGCEO43556 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.75□□□□□ -2.13
SGCEO43556 MTND4P3-201ENST00000417829 541 ntBASIC1.75□□□□□ -2.13
SGCEO43556 AC244035.1-201ENST00000430042 390 ntBASIC1.75□□□□□ -2.13
SGCEO43556 GTF2IP3-201ENST00000433887 494 ntBASIC1.75□□□□□ -2.13
SGCEO43556 DNAJC19P4-201ENST00000440115 345 ntBASIC1.75□□□□□ -2.13
SGCEO43556 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SGCEO43556 RPL7P12-201ENST00000446719 750 ntBASIC1.75□□□□□ -2.13
SGCEO43556 AC017099.1-201ENST00000448261 1028 ntBASIC1.75□□□□□ -2.13
SGCEO43556 AC117503.1-201ENST00000472241 394 ntBASIC1.75□□□□□ -2.13
SGCEO43556 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.75□□□□□ -2.13
SGCEO43556 AC024589.1-201ENST00000512207 263 ntBASIC1.75□□□□□ -2.13
SGCEO43556 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.75□□□□□ -2.13
SGCEO43556 AC005832.3-201ENST00000537929 631 ntBASIC1.75□□□□□ -2.13
SGCEO43556 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.75□□□□□ -2.13
SGCEO43556 AC023825.1-201ENST00000566704 1030 ntBASIC1.75□□□□□ -2.13
SGCEO43556 AC012435.1-202ENST00000568772 240 ntBASIC1.75□□□□□ -2.13
SGCEO43556 AC104072.1-201ENST00000568817 668 ntBASIC1.75□□□□□ -2.13
SGCEO43556 AC098826.3-201ENST00000603823 466 ntBASIC1.75□□□□□ -2.13
SGCEO43556 AL161798.1-201ENST00000604630 131 ntBASIC1.75□□□□□ -2.13
SGCEO43556 AC007038.2-201ENST00000608095 740 ntBASIC1.75□□□□□ -2.13
SGCEO43556 AC103710.1-201ENST00000610003 901 ntBASIC1.75□□□□□ -2.13
SGCEO43556 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SGCEO43556 AC009233.1-201ENST00000616477 371 ntBASIC1.75□□□□□ -2.13
SGCEO43556 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
SGCEO43556 Z75746.1-201ENST00000440243 2080 ntBASIC1.75□□□□□ -2.13
SGCEO43556 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SGCEO43556 RNU6-658P-201ENST00000384606 106 ntBASIC1.74□□□□□ -2.13
SGCEO43556 AL021407.1-201ENST00000404531 386 ntBASIC1.74□□□□□ -2.13
SGCEO43556 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.74□□□□□ -2.13
SGCEO43556 USP9YP21-201ENST00000420603 432 ntBASIC1.74□□□□□ -2.13
SGCEO43556 AC097463.2-201ENST00000421074 142 ntBASIC1.74□□□□□ -2.13
SGCEO43556 RPL36AP53-201ENST00000432891 316 ntBASIC1.74□□□□□ -2.13
SGCEO43556 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.74□□□□□ -2.13
SGCEO43556 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.74□□□□□ -2.13
SGCEO43556 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.74□□□□□ -2.13
SGCEO43556 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.74□□□□□ -2.13
SGCEO43556 AC018437.1-201ENST00000492214 406 ntBASIC1.74□□□□□ -2.13
SGCEO43556 AC093809.1-201ENST00000509155 340 ntBASIC1.74□□□□□ -2.13
SGCEO43556 RNU6-150P-201ENST00000516237 95 ntBASIC1.74□□□□□ -2.13
SGCEO43556 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
SGCEO43556 DEFB131D-201ENST00000526803 184 ntBASIC1.74□□□□□ -2.13
SGCEO43556 FAM92A1P1-201ENST00000528023 890 ntBASIC1.74□□□□□ -2.13
SGCEO43556 AC093012.1-202ENST00000549403 582 ntBASIC1.74□□□□□ -2.13
SGCEO43556 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.74□□□□□ -2.13
SGCEO43556 AL132657.2-201ENST00000564417 358 ntBASIC1.74□□□□□ -2.13
SGCEO43556 AC090079.2-201ENST00000575289 768 ntBASIC1.74□□□□□ -2.13
SGCEO43556 AC126365.2-201ENST00000580630 379 ntBASIC1.74□□□□□ -2.13
SGCEO43556 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.74□□□□□ -2.13
SGCEO43556 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.74□□□□□ -2.13
SGCEO43556 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.74□□□□□ -2.13
SGCEO43556 AC091057.3-201ENST00000602684 733 ntBASIC1.74□□□□□ -2.13
SGCEO43556 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.74□□□□□ -2.13
SGCEO43556 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.74□□□□□ -2.13
SGCEO43556 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
SGCEO43556 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.74□□□□□ -2.13
SGCEO43556 AC005296.1-201ENST00000616145 209 ntBASIC1.74□□□□□ -2.13
SGCEO43556 AC018926.1-201ENST00000616335 435 ntBASIC1.74□□□□□ -2.13
SGCEO43556 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SGCEO43556 ZNF702P-202ENST00000434269 1966 ntBASIC1.74□□□□□ -2.13
SGCEO43556 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.73□□□□□ -2.13
SGCEO43556 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
SGCEO43556 NACAP2-201ENST00000318548 624 ntBASIC1.73□□□□□ -2.13
SGCEO43556 RNU6-744P-201ENST00000365557 107 ntBASIC1.73□□□□□ -2.13
SGCEO43556 RNU6-1316P-201ENST00000384242 108 ntBASIC1.73□□□□□ -2.13
SGCEO43556 RNU6-748P-201ENST00000384648 107 ntBASIC1.73□□□□□ -2.13
SGCEO43556 XKRYP1-201ENST00000423438 492 ntBASIC1.73□□□□□ -2.13
SGCEO43556 AL445646.1-201ENST00000431784 216 ntBASIC1.73□□□□□ -2.13
SGCEO43556 XKRYP2-201ENST00000432915 492 ntBASIC1.73□□□□□ -2.13
SGCEO43556 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.73□□□□□ -2.13
SGCEO43556 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.73□□□□□ -2.13
SGCEO43556 SNRPEP7-201ENST00000438350 220 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms