Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF3O43395 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF3O43395 MRPS31P2-201ENST00000451581 518 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF3O43395 MTCO3P38-201ENST00000468910 766 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 AC093663.1-201ENST00000497190 394 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 RPL38P4-201ENST00000502376 214 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 FCF1P8-201ENST00000510322 597 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.93□□□□□ -1.78
PRPF3O43395 RNU6-835P-201ENST00000516974 104 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.93□□□□□ -1.78
PRPF3O43395 NACAP3-201ENST00000552100 481 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 AL157871.3-201ENST00000557231 293 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 AC008752.3-201ENST00000588113 712 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.93□□□□□ -1.78
PRPF3O43395 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.93□□□□□ -1.78
PRPF3O43395 AC024220.1-201ENST00000603675 484 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 AL670379.4-201ENST00000605279 254 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 AC104458.1-201ENST00000608243 463 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 AC092628.2-201ENST00000622492 339 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 Z99571.1-201ENST00000636677 394 ntBASIC3.93□□□□□ -1.78
PRPF3O43395 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF3O43395 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF3O43395 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PRPF3O43395 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.92□□□□□ -1.78
PRPF3O43395 MIR591-201ENST00000385290 95 ntBASIC3.92□□□□□ -1.78
PRPF3O43395 RNU6-903P-201ENST00000391270 109 ntBASIC3.92□□□□□ -1.78
PRPF3O43395 RPL26P27-201ENST00000414397 437 ntBASIC3.92□□□□□ -1.78
PRPF3O43395 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.92□□□□□ -1.78
PRPF3O43395 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.92□□□□□ -1.78
PRPF3O43395 AL592045.1-201ENST00000429867 352 ntBASIC3.92□□□□□ -1.78
PRPF3O43395 RPL36AP53-201ENST00000432891 316 ntBASIC3.92□□□□□ -1.78
PRPF3O43395 RPL23AP83-201ENST00000434984 473 ntBASIC3.92□□□□□ -1.78
PRPF3O43395 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.92□□□□□ -1.78
PRPF3O43395 AC012181.1-201ENST00000479895 423 ntBASIC3.92□□□□□ -1.78
PRPF3O43395 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.92□□□□□ -1.78
PRPF3O43395 MTND1P35-201ENST00000526739 508 ntBASIC3.92□□□□□ -1.78
PRPF3O43395 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF3O43395 AP005435.4-201ENST00000529514 284 ntBASIC3.92□□□□□ -1.78
PRPF3O43395 AL137161.1-201ENST00000532231 390 ntBASIC3.92□□□□□ -1.78
PRPF3O43395 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.92□□□□□ -1.78
PRPF3O43395 AL133241.1-201ENST00000556832 487 ntBASIC3.92□□□□□ -1.78
PRPF3O43395 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.92□□□□□ -1.78
PRPF3O43395 YWHAEP7-203ENST00000622054 312 ntBASIC3.92□□□□□ -1.78
PRPF3O43395 AC073308.1-201ENST00000623696 305 ntBASIC3.92□□□□□ -1.78
PRPF3O43395 AC010680.1-201ENST00000590024 3590 ntBASIC3.92□□□□□ -1.78
PRPF3O43395 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PRPF3O43395 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
PRPF3O43395 AC017071.1-201ENST00000564407 2204 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRPF3O43395 Y_RNA.33-201ENST00000362591 102 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 RNA5SP197-201ENST00000363357 119 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 RNA5SP50-201ENST00000363731 107 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 RNU6-877P-201ENST00000383868 107 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 CISD1P1-201ENST00000393907 327 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 RNU6-373P-201ENST00000411247 98 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 NDUFS5P4-201ENST00000412983 318 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.91□□□□□ -1.78
PRPF3O43395 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.91□□□□□ -1.78
PRPF3O43395 HMGN2P30-201ENST00000423237 256 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.91□□□□□ -1.78
PRPF3O43395 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.91□□□□□ -1.78
PRPF3O43395 RPL37P4-201ENST00000448908 268 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.91□□□□□ -1.78
PRPF3O43395 MTATP6P7-201ENST00000453315 681 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 RPL23AP67-201ENST00000465341 474 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 RPL7P5-201ENST00000471472 736 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.91□□□□□ -1.78
PRPF3O43395 MIR548AC-201ENST00000585049 88 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 HSPE1P7-201ENST00000604681 321 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 AC004805.2-201ENST00000605382 482 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 AL355365.1-201ENST00000616480 294 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 U6.42-201ENST00000618440 107 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 PLCE1P1-201ENST00000622094 305 ntBASIC3.91□□□□□ -1.78
PRPF3O43395 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.91□□□□□ -1.78
PRPF3O43395 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
PRPF3O43395 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRPF3O43395 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
PRPF3O43395 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PRPF3O43395 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PRPF3O43395 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.9□□□□□ -1.78
PRPF3O43395 AP001486.2-201ENST00000561652 5113 ntBASIC3.9□□□□□ -1.78
PRPF3O43395 FTLP6-201ENST00000355274 422 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 RNY3P3-201ENST00000363816 102 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF3O43395 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PRPF3O43395 RNU6-908P-201ENST00000410160 94 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 RNA5SP38-201ENST00000410750 119 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 AC126124.2-201ENST00000413542 321 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 AC092809.3-201ENST00000415453 231 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 AC007390.1-201ENST00000415722 356 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.9□□□□□ -1.79
PRPF3O43395 AL158156.1-201ENST00000422509 473 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF3O43395 AL159987.2-201ENST00000432754 307 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF3O43395 BRK1P2-201ENST00000442875 223 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 AL162395.1-201ENST00000457882 422 ntBASIC3.9□□□□□ -1.79
PRPF3O43395 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF3O43395 AC233702.1-201ENST00000482905 502 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms