Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 Y_RNA.188-201ENST00000363952 111 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 SMIM11P1-201ENST00000369586 178 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 RNU6-26P-201ENST00000383985 107 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 RN7SKP27-201ENST00000410684 333 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 HMGB3P2-201ENST00000411913 584 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 RPL7P10-201ENST00000417407 739 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 AC114482.1-201ENST00000418010 247 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 SAGE2P-201ENST00000420011 2126 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 RPL30P3-201ENST00000424262 333 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.53□□□□□ -1.68
SRGAP3O43295 AC010683.1-201ENST00000473673 378 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 AC087385.1-201ENST00000475062 312 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 AC015911.1-201ENST00000495111 156 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 AC104619.4-201ENST00000510773 249 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 RNU6-1332P-201ENST00000516666 104 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 RN7SKP277-201ENST00000516895 283 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 RNA5SP143-201ENST00000516936 115 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 Y_RNA.708-201ENST00000516950 96 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 RNU6-1271P-201ENST00000517049 105 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 RNU6-685P-201ENST00000517088 95 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 RNU1-54P-201ENST00000517181 120 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRGAP3O43295 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.53□□□□□ -1.68
SRGAP3O43295 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.53□□□□□ -1.68
SRGAP3O43295 CR383656.7-201ENST00000548164 174 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 AC090115.3-201ENST00000553218 849 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 AL121576.1-201ENST00000556055 276 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.53□□□□□ -1.68
SRGAP3O43295 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.53□□□□□ -1.68
SRGAP3O43295 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.53□□□□□ -1.68
SRGAP3O43295 MIR3941-201ENST00000582572 103 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 MIR5692C1-201ENST00000585309 91 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 AL031176.1-201ENST00000604554 466 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 AC009570.1-201ENST00000609599 745 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 AL442067.1-201ENST00000613261 223 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 SNHG22-203ENST00000617833 660 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 AL034408.1-202ENST00000636088 415 ntBASIC4.53□□□□□ -1.68
SRGAP3O43295 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.53□□□□□ -1.68
SRGAP3O43295 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRGAP3O43295 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SRGAP3O43295 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.53□□□□□ -1.68
SRGAP3O43295 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SRGAP3O43295 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
SRGAP3O43295 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.52□□□□□ -1.69
SRGAP3O43295 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SRGAP3O43295 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SRGAP3O43295 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SRGAP3O43295 AP001486.2-201ENST00000561652 5113 ntBASIC4.52□□□□□ -1.69
SRGAP3O43295 SNORD9-201ENST00000362566 104 ntBASIC4.52□□□□□ -1.69
SRGAP3O43295 AL359837.1-201ENST00000381357 287 ntBASIC4.52□□□□□ -1.69
SRGAP3O43295 RNY1P14-201ENST00000384426 108 ntBASIC4.52□□□□□ -1.69
SRGAP3O43295 RNU6-1222P-201ENST00000384615 107 ntBASIC4.52□□□□□ -1.69
SRGAP3O43295 MT-TC-201ENST00000387405 66 ntBASIC4.52□□□□□ -1.69
SRGAP3O43295 SNORA16.2-201ENST00000390991 127 ntBASIC4.52□□□□□ -1.69
SRGAP3O43295 RNU6-754P-201ENST00000391166 107 ntBASIC4.52□□□□□ -1.69
SRGAP3O43295 RNU4-65P-201ENST00000410473 140 ntBASIC4.52□□□□□ -1.69
SRGAP3O43295 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.52□□□□□ -1.69
SRGAP3O43295 ATG3P1-201ENST00000419507 911 ntBASIC4.52□□□□□ -1.69
SRGAP3O43295 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SRGAP3O43295 AL590632.1-201ENST00000424289 371 ntBASIC4.52□□□□□ -1.69
SRGAP3O43295 GSTA11P-201ENST00000452866 669 ntBASIC4.52□□□□□ -1.69
SRGAP3O43295 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.52□□□□□ -1.69
SRGAP3O43295 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.52□□□□□ -1.69
SRGAP3O43295 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.52□□□□□ -1.69
SRGAP3O43295 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SRGAP3O43295 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.52□□□□□ -1.69
SRGAP3O43295 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.52□□□□□ -1.69
SRGAP3O43295 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SRGAP3O43295 MAPK10-373ENST00000641983 6772 ntBASIC4.52□□□□□ -1.69
SRGAP3O43295 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SRGAP3O43295 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.52□□□□□ -1.69
SRGAP3O43295 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SRGAP3O43295 AC007656.2-201ENST00000624902 4547 ntBASIC4.52□□□□□ -1.69
SRGAP3O43295 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SRGAP3O43295 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SRGAP3O43295 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SRGAP3O43295 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SRGAP3O43295 MAPK10-372ENST00000641954 3413 ntBASIC4.51□□□□□ -1.69
SRGAP3O43295 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SRGAP3O43295 Y_RNA.252-201ENST00000364556 101 ntBASIC4.51□□□□□ -1.69
SRGAP3O43295 Y_RNA.404-201ENST00000383978 102 ntBASIC4.51□□□□□ -1.69
SRGAP3O43295 RNU6-701P-201ENST00000384059 107 ntBASIC4.51□□□□□ -1.69
SRGAP3O43295 NDUFS5P1-201ENST00000405668 289 ntBASIC4.51□□□□□ -1.69
SRGAP3O43295 RPLP0P7-201ENST00000416050 667 ntBASIC4.51□□□□□ -1.69
SRGAP3O43295 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.51□□□□□ -1.69
SRGAP3O43295 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SRGAP3O43295 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.51□□□□□ -1.69
SRGAP3O43295 RN7SKP18-201ENST00000516005 275 ntBASIC4.51□□□□□ -1.69
SRGAP3O43295 Y_RNA.670-201ENST00000516255 105 ntBASIC4.51□□□□□ -1.69
SRGAP3O43295 RNU6-635P-201ENST00000516651 102 ntBASIC4.51□□□□□ -1.69
SRGAP3O43295 AC026403.1-201ENST00000518938 295 ntBASIC4.51□□□□□ -1.69
SRGAP3O43295 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.51□□□□□ -1.69
SRGAP3O43295 AC112200.1-201ENST00000625015 234 ntBASIC4.51□□□□□ -1.69
SRGAP3O43295 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SRGAP3O43295 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SRGAP3O43295 AL356489.2-201ENST00000566968 3528 ntBASIC4.51□□□□□ -1.69
SRGAP3O43295 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.5□□□□□ -1.69
SRGAP3O43295 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SRGAP3O43295 AC007529.1-201ENST00000418574 2178 ntBASIC4.5□□□□□ -1.69
SRGAP3O43295 DDX18P3-201ENST00000404856 2007 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms