Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC024619.4-201ENST00000580924 316 ntBASIC2.97□□□□□ -1.93
TO15178 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.97□□□□□ -1.93
TO15178 SRGNP1-201ENST00000603392 451 ntBASIC2.97□□□□□ -1.93
TO15178 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.97□□□□□ -1.93
TO15178 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.97□□□□□ -1.93
TO15178 AC022893.3-201ENST00000607665 437 ntBASIC2.97□□□□□ -1.93
TO15178 FTX_3.1-201ENST00000610451 147 ntBASIC2.97□□□□□ -1.93
TO15178 AC122108.2-201ENST00000611946 526 ntBASIC2.97□□□□□ -1.93
TO15178 MIR7112-201ENST00000616126 65 ntBASIC2.97□□□□□ -1.93
TO15178 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
TO15178 AC025034.2-201ENST00000623264 286 ntBASIC2.97□□□□□ -1.93
TO15178 AC093648.1-201ENST00000623546 606 ntBASIC2.97□□□□□ -1.93
TO15178 AC124864.2-201ENST00000624736 186 ntBASIC2.97□□□□□ -1.93
TO15178 AC005609.4-201ENST00000625071 447 ntBASIC2.97□□□□□ -1.93
TO15178 AC110079.1-202ENST00000635213 138 ntBASIC2.97□□□□□ -1.93
TO15178 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.97□□□□□ -1.93
TO15178 U6.114-201ENST00000636407 96 ntBASIC2.97□□□□□ -1.93
TO15178 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.97□□□□□ -1.93
TO15178 AC099654.12-201ENST00000639868 649 ntBASIC2.97□□□□□ -1.93
TO15178 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
TO15178 AC138915.1-201ENST00000565427 1685 ntBASIC2.97□□□□□ -1.93
TO15178 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
TO15178 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TO15178 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
TO15178 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
TO15178 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.93
TO15178 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
TO15178 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
TO15178 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TO15178 SNORD56.5-201ENST00000364281 72 ntBASIC2.96□□□□□ -1.94
TO15178 RNU6-61P-201ENST00000365528 109 ntBASIC2.96□□□□□ -1.94
TO15178 RNU4-48P-201ENST00000365559 182 ntBASIC2.96□□□□□ -1.94
TO15178 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.96□□□□□ -1.94
TO15178 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
TO15178 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.96□□□□□ -1.94
TO15178 AC080125.1-201ENST00000414888 684 ntBASIC2.96□□□□□ -1.94
TO15178 RPL7P10-201ENST00000417407 739 ntBASIC2.96□□□□□ -1.94
TO15178 AC093151.1-201ENST00000427711 313 ntBASIC2.96□□□□□ -1.94
TO15178 SNRPEP9-201ENST00000436794 238 ntBASIC2.96□□□□□ -1.94
TO15178 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.96□□□□□ -1.94
TO15178 RPS24P13-201ENST00000442520 397 ntBASIC2.96□□□□□ -1.94
TO15178 PSPHP1-201ENST00000450062 261 ntBASIC2.96□□□□□ -1.94
TO15178 FABP5P15-201ENST00000453566 214 ntBASIC2.96□□□□□ -1.94
TO15178 RNU7-182P-201ENST00000459009 62 ntBASIC2.96□□□□□ -1.94
TO15178 MRPS17P3-201ENST00000465453 385 ntBASIC2.96□□□□□ -1.94
TO15178 RPS15AP34-201ENST00000487776 387 ntBASIC2.96□□□□□ -1.94
TO15178 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.96□□□□□ -1.94
TO15178 AC104027.1-201ENST00000521887 300 ntBASIC2.96□□□□□ -1.94
TO15178 MTCYBP20-201ENST00000524239 1129 ntBASIC2.96□□□□□ -1.94
TO15178 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TO15178 AP003034.1-201ENST00000534621 422 ntBASIC2.96□□□□□ -1.94
TO15178 MIR5680-201ENST00000577577 84 ntBASIC2.96□□□□□ -1.94
TO15178 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.96□□□□□ -1.94
TO15178 AC008739.2-201ENST00000597006 317 ntBASIC2.96□□□□□ -1.94
TO15178 AC012507.3-201ENST00000603556 477 ntBASIC2.96□□□□□ -1.94
TO15178 AC130324.3-201ENST00000614165 542 ntBASIC2.96□□□□□ -1.94
TO15178 AC073308.1-201ENST00000623696 305 ntBASIC2.96□□□□□ -1.94
TO15178 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.96□□□□□ -1.94
TO15178 MIR6863-201ENST00000636112 90 ntBASIC2.96□□□□□ -1.94
TO15178 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TO15178 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
TO15178 MTND5P1-201ENST00000445440 1375 ntBASIC2.96□□□□□ -1.94
TO15178 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TO15178 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
TO15178 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
TO15178 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TO15178 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TO15178 FTLP6-201ENST00000355274 422 ntBASIC2.95□□□□□ -1.94
TO15178 Y_RNA.41-201ENST00000362646 102 ntBASIC2.95□□□□□ -1.94
TO15178 Y_RNA.159-201ENST00000363674 87 ntBASIC2.95□□□□□ -1.94
TO15178 RNU6-270P-201ENST00000364131 105 ntBASIC2.95□□□□□ -1.94
TO15178 SNORA51.4-201ENST00000364993 124 ntBASIC2.95□□□□□ -1.94
TO15178 RNU6-606P-201ENST00000384721 111 ntBASIC2.95□□□□□ -1.94
TO15178 MIR301A-201ENST00000385261 86 ntBASIC2.95□□□□□ -1.94
TO15178 RNA5SP354-201ENST00000391247 136 ntBASIC2.95□□□□□ -1.94
TO15178 RNA5SP344-201ENST00000411081 104 ntBASIC2.95□□□□□ -1.94
TO15178 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.95□□□□□ -1.94
TO15178 OR51A5P-201ENST00000415429 942 ntBASIC2.95□□□□□ -1.94
TO15178 AL513477.1-202ENST00000417061 214 ntBASIC2.95□□□□□ -1.94
TO15178 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TO15178 MTCO2P19-201ENST00000427513 598 ntBASIC2.95□□□□□ -1.94
TO15178 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.95□□□□□ -1.94
TO15178 MTND3P21-201ENST00000433774 331 ntBASIC2.95□□□□□ -1.94
TO15178 AC006028.1-201ENST00000438379 402 ntBASIC2.95□□□□□ -1.94
TO15178 DDX3P2-201ENST00000446138 111 ntBASIC2.95□□□□□ -1.94
TO15178 AC115115.1-201ENST00000449927 248 ntBASIC2.95□□□□□ -1.94
TO15178 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.95□□□□□ -1.94
TO15178 CECR9-201ENST00000453421 199 ntBASIC2.95□□□□□ -1.94
TO15178 AL590639.1-201ENST00000456484 337 ntBASIC2.95□□□□□ -1.94
TO15178 snoU13.28-201ENST00000459235 104 ntBASIC2.95□□□□□ -1.94
TO15178 RPS3AP14-201ENST00000483907 780 ntBASIC2.95□□□□□ -1.94
TO15178 SCARNA20.6-201ENST00000517251 106 ntBASIC2.95□□□□□ -1.94
TO15178 AC245166.1-201ENST00000521012 253 ntBASIC2.95□□□□□ -1.94
TO15178 OR5AL2P-201ENST00000532185 920 ntBASIC2.95□□□□□ -1.94
TO15178 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.95□□□□□ -1.94
TO15178 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.95□□□□□ -1.94
TO15178 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.95□□□□□ -1.94
TO15178 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.95□□□□□ -1.94
TO15178 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.95□□□□□ -1.94
TO15178 AC078899.3-201ENST00000599065 212 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms