Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 RNU6-413P-201ENST00000384115 107 ntBASIC1.95□□□□□ -2.1
DFFAO00273 SNORD116-12-201ENST00000384468 92 ntBASIC1.95□□□□□ -2.1
DFFAO00273 SNORA40.4-201ENST00000390971 128 ntBASIC1.95□□□□□ -2.1
DFFAO00273 AC019129.1-201ENST00000403786 261 ntBASIC1.95□□□□□ -2.1
DFFAO00273 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.95□□□□□ -2.1
DFFAO00273 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.95□□□□□ -2.1
DFFAO00273 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.95□□□□□ -2.1
DFFAO00273 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.95□□□□□ -2.1
DFFAO00273 GPM6BP3-201ENST00000442797 145 ntBASIC1.95□□□□□ -2.1
DFFAO00273 AC007327.1-201ENST00000447461 264 ntBASIC1.95□□□□□ -2.1
DFFAO00273 FABP5P13-201ENST00000452144 328 ntBASIC1.95□□□□□ -2.1
DFFAO00273 USP9YP10-201ENST00000454868 628 ntBASIC1.95□□□□□ -2.1
DFFAO00273 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.95□□□□□ -2.1
DFFAO00273 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.95□□□□□ -2.1
DFFAO00273 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.95□□□□□ -2.1
DFFAO00273 AC022493.1-201ENST00000492984 337 ntBASIC1.95□□□□□ -2.1
DFFAO00273 AC104629.1-201ENST00000494226 508 ntBASIC1.95□□□□□ -2.1
DFFAO00273 AC079395.1-201ENST00000510981 262 ntBASIC1.95□□□□□ -2.1
DFFAO00273 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.95□□□□□ -2.1
DFFAO00273 RNA5SP165-201ENST00000517142 115 ntBASIC1.95□□□□□ -2.1
DFFAO00273 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.95□□□□□ -2.1
DFFAO00273 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.95□□□□□ -2.1
DFFAO00273 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.95□□□□□ -2.1
DFFAO00273 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
DFFAO00273 MIR3945-201ENST00000581853 98 ntBASIC1.95□□□□□ -2.1
DFFAO00273 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.95□□□□□ -2.1
DFFAO00273 AC103710.2-201ENST00000609912 942 ntBASIC1.95□□□□□ -2.1
DFFAO00273 PART1_2.1-201ENST00000612397 250 ntBASIC1.95□□□□□ -2.1
DFFAO00273 AL162373.1-201ENST00000620433 407 ntBASIC1.95□□□□□ -2.1
DFFAO00273 AC098657.3-201ENST00000620434 263 ntBASIC1.95□□□□□ -2.1
DFFAO00273 AC079416.3-201ENST00000624479 549 ntBASIC1.95□□□□□ -2.1
DFFAO00273 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.95□□□□□ -2.1
DFFAO00273 MTND5P30-201ENST00000452896 1731 ntBASIC1.94□□□□□ -2.1
DFFAO00273 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
DFFAO00273 AL109809.4-201ENST00000603520 2185 ntBASIC1.94□□□□□ -2.1
DFFAO00273 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.94□□□□□ -2.1
DFFAO00273 RNA5SP125-201ENST00000364843 120 ntBASIC1.94□□□□□ -2.1
DFFAO00273 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
DFFAO00273 SNORA46.1-201ENST00000391069 153 ntBASIC1.94□□□□□ -2.1
DFFAO00273 RNU2-68P-201ENST00000410878 191 ntBASIC1.94□□□□□ -2.1
DFFAO00273 RPL21P24-201ENST00000413752 448 ntBASIC1.94□□□□□ -2.1
DFFAO00273 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.94□□□□□ -2.1
DFFAO00273 AC244035.1-201ENST00000430042 390 ntBASIC1.94□□□□□ -2.1
DFFAO00273 NANOGP2-201ENST00000435391 727 ntBASIC1.94□□□□□ -2.1
DFFAO00273 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.94□□□□□ -2.1
DFFAO00273 AL513124.1-201ENST00000450410 614 ntBASIC1.94□□□□□ -2.1
DFFAO00273 AC080013.2-201ENST00000460866 323 ntBASIC1.94□□□□□ -2.1
DFFAO00273 AC010631.1-201ENST00000474150 156 ntBASIC1.94□□□□□ -2.1
DFFAO00273 AC072039.1-201ENST00000477611 581 ntBASIC1.94□□□□□ -2.1
DFFAO00273 AC068587.2-201ENST00000478386 781 ntBASIC1.94□□□□□ -2.1
DFFAO00273 AC021146.8-201ENST00000507455 733 ntBASIC1.94□□□□□ -2.1
DFFAO00273 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.94□□□□□ -2.1
DFFAO00273 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.94□□□□□ -2.1
DFFAO00273 AC109445.1-201ENST00000512356 383 ntBASIC1.94□□□□□ -2.1
DFFAO00273 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.94□□□□□ -2.1
DFFAO00273 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.94□□□□□ -2.1
DFFAO00273 AC010376.1-201ENST00000522101 334 ntBASIC1.94□□□□□ -2.1
DFFAO00273 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.94□□□□□ -2.1
DFFAO00273 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.94□□□□□ -2.1
DFFAO00273 AL133153.1-201ENST00000557756 303 ntBASIC1.94□□□□□ -2.1
DFFAO00273 AC005261.5-201ENST00000596280 355 ntBASIC1.94□□□□□ -2.1
DFFAO00273 AL161798.1-201ENST00000604630 131 ntBASIC1.94□□□□□ -2.1
DFFAO00273 AC025048.6-202ENST00000627667 438 ntBASIC1.94□□□□□ -2.1
DFFAO00273 PCMTD1P7-201ENST00000634506 357 ntBASIC1.94□□□□□ -2.1
DFFAO00273 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
DFFAO00273 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
DFFAO00273 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
DFFAO00273 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.94□□□□□ -2.1
DFFAO00273 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
DFFAO00273 AC092881.1-201ENST00000638218 2733 ntBASIC1.93□□□□□ -2.1
DFFAO00273 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
DFFAO00273 HSPE1P11-201ENST00000339579 310 ntBASIC1.93□□□□□ -2.1
DFFAO00273 OR56A5-201ENST00000340110 738 ntBASIC1.93□□□□□ -2.1
DFFAO00273 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
DFFAO00273 MIR17-201ENST00000385012 84 ntBASIC1.93□□□□□ -2.1
DFFAO00273 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
DFFAO00273 VN1R51P-201ENST00000411675 945 ntBASIC1.93□□□□□ -2.1
DFFAO00273 RPL30P4-201ENST00000429309 333 ntBASIC1.93□□□□□ -2.1
DFFAO00273 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
DFFAO00273 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.93□□□□□ -2.1
DFFAO00273 HMGB3P12-201ENST00000438745 556 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AC003989.2-201ENST00000440224 169 ntBASIC1.93□□□□□ -2.1
DFFAO00273 HMGN2P10-201ENST00000448085 265 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AP000542.1-201ENST00000448473 371 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
DFFAO00273 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.93□□□□□ -2.1
DFFAO00273 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.93□□□□□ -2.1
DFFAO00273 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.93□□□□□ -2.1
DFFAO00273 AC093809.1-201ENST00000509155 340 ntBASIC1.93□□□□□ -2.1
DFFAO00273 RNU7-193P-201ENST00000516723 65 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AC006199.1-201ENST00000548728 219 ntBASIC1.93□□□□□ -2.1
DFFAO00273 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.93□□□□□ -2.1
DFFAO00273 AC021739.1-201ENST00000559631 174 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.93□□□□□ -2.1
DFFAO00273 AL138976.2-201ENST00000563989 694 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.93□□□□□ -2.1
DFFAO00273 AC105245.1-201ENST00000581934 244 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AC008749.1-201ENST00000597650 306 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AC068790.3-201ENST00000602988 553 ntBASIC1.93□□□□□ -2.1
DFFAO00273 AC098826.3-201ENST00000603823 466 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms