Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MTND3P7-201ENST00000474435 343 ntBASIC2.54□□□□□ -2
PDLIM1O00151 SRIP1-201ENST00000489235 288 ntBASIC2.54□□□□□ -2
PDLIM1O00151 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.54□□□□□ -2
PDLIM1O00151 AC117522.3-201ENST00000507974 584 ntBASIC2.54□□□□□ -2
PDLIM1O00151 HIGD1AP13-201ENST00000509878 289 ntBASIC2.54□□□□□ -2
PDLIM1O00151 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.54□□□□□ -2
PDLIM1O00151 SCGB1D5P-201ENST00000515134 247 ntBASIC2.54□□□□□ -2
PDLIM1O00151 RNU2-10P-201ENST00000516375 211 ntBASIC2.54□□□□□ -2
PDLIM1O00151 AC011979.2-201ENST00000527568 352 ntBASIC2.54□□□□□ -2
PDLIM1O00151 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.54□□□□□ -2
PDLIM1O00151 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.54□□□□□ -2
PDLIM1O00151 OSBPL9P5-201ENST00000542581 171 ntBASIC2.54□□□□□ -2
PDLIM1O00151 ARL2BPP2-201ENST00000550907 489 ntBASIC2.54□□□□□ -2
PDLIM1O00151 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.54□□□□□ -2
PDLIM1O00151 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.54□□□□□ -2
PDLIM1O00151 AC024153.1-201ENST00000603103 365 ntBASIC2.54□□□□□ -2
PDLIM1O00151 AL355877.2-201ENST00000603670 358 ntBASIC2.54□□□□□ -2
PDLIM1O00151 MTND4LP5-201ENST00000605152 292 ntBASIC2.54□□□□□ -2
PDLIM1O00151 AL033523.1-201ENST00000605153 153 ntBASIC2.54□□□□□ -2
PDLIM1O00151 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.54□□□□□ -2
PDLIM1O00151 AC034102.8-201ENST00000615146 484 ntBASIC2.54□□□□□ -2
PDLIM1O00151 AL589994.2-201ENST00000621124 579 ntBASIC2.54□□□□□ -2
PDLIM1O00151 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PDLIM1O00151 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
PDLIM1O00151 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
PDLIM1O00151 UBE2L2-201ENST00000254302 429 ntBASIC2.53□□□□□ -2
PDLIM1O00151 RNU6-525P-201ENST00000363685 104 ntBASIC2.53□□□□□ -2
PDLIM1O00151 MIR524-201ENST00000385242 87 ntBASIC2.53□□□□□ -2
PDLIM1O00151 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.53□□□□□ -2
PDLIM1O00151 RNU2-36P-201ENST00000410361 191 ntBASIC2.53□□□□□ -2
PDLIM1O00151 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.53□□□□□ -2
PDLIM1O00151 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.53□□□□□ -2
PDLIM1O00151 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.53□□□□□ -2
PDLIM1O00151 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.53□□□□□ -2
PDLIM1O00151 ELOCP14-201ENST00000428070 331 ntBASIC2.53□□□□□ -2
PDLIM1O00151 GPM6BP2-201ENST00000432046 144 ntBASIC2.53□□□□□ -2
PDLIM1O00151 ELOCP7-201ENST00000439968 331 ntBASIC2.53□□□□□ -2
PDLIM1O00151 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.53□□□□□ -2
PDLIM1O00151 GPM6BP1-201ENST00000446387 144 ntBASIC2.53□□□□□ -2
PDLIM1O00151 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.53□□□□□ -2
PDLIM1O00151 AC133134.1-201ENST00000466800 359 ntBASIC2.53□□□□□ -2
PDLIM1O00151 RPL31P41-201ENST00000477967 372 ntBASIC2.53□□□□□ -2
PDLIM1O00151 MRPL42P6-201ENST00000486397 371 ntBASIC2.53□□□□□ -2
PDLIM1O00151 AC010587.1-201ENST00000505809 469 ntBASIC2.53□□□□□ -2
PDLIM1O00151 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
PDLIM1O00151 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.53□□□□□ -2
PDLIM1O00151 AC087241.2-201ENST00000535801 324 ntBASIC2.53□□□□□ -2
PDLIM1O00151 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.53□□□□□ -2
PDLIM1O00151 AL670379.6-201ENST00000603753 252 ntBASIC2.53□□□□□ -2
PDLIM1O00151 AC098826.3-201ENST00000603823 466 ntBASIC2.53□□□□□ -2
PDLIM1O00151 AL670379.11-201ENST00000604059 253 ntBASIC2.53□□□□□ -2
PDLIM1O00151 AC008162.1-201ENST00000604718 254 ntBASIC2.53□□□□□ -2
PDLIM1O00151 AL670379.1-201ENST00000604752 252 ntBASIC2.53□□□□□ -2
PDLIM1O00151 AL670379.5-201ENST00000605253 252 ntBASIC2.53□□□□□ -2
PDLIM1O00151 AL670379.12-201ENST00000605291 253 ntBASIC2.53□□□□□ -2
PDLIM1O00151 AL670379.8-201ENST00000605353 252 ntBASIC2.53□□□□□ -2
PDLIM1O00151 AC004805.2-201ENST00000605382 482 ntBASIC2.53□□□□□ -2
PDLIM1O00151 AL670379.7-201ENST00000605823 252 ntBASIC2.53□□□□□ -2
PDLIM1O00151 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.53□□□□□ -2
PDLIM1O00151 AC138749.5-201ENST00000611461 208 ntBASIC2.53□□□□□ -2
PDLIM1O00151 MIR6840-201ENST00000611937 71 ntBASIC2.53□□□□□ -2
PDLIM1O00151 AC116165.2-201ENST00000616705 206 ntBASIC2.53□□□□□ -2
PDLIM1O00151 AC025048.6-202ENST00000627667 438 ntBASIC2.53□□□□□ -2
PDLIM1O00151 AP003399.1-201ENST00000637534 361 ntBASIC2.53□□□□□ -2
PDLIM1O00151 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
PDLIM1O00151 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.52□□□□□ -2.01
PDLIM1O00151 MTND5P29-201ENST00000458676 1807 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
PDLIM1O00151 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
PDLIM1O00151 AL365361.1-201ENST00000566942 3481 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 SNORA80A-201ENST00000363922 136 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 U8.8-201ENST00000365399 135 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PDLIM1O00151 SNORA26.8-201ENST00000391306 124 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PDLIM1O00151 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.52□□□□□ -2.01
PDLIM1O00151 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.52□□□□□ -2.01
PDLIM1O00151 SEPT2P1-201ENST00000419651 180 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.52□□□□□ -2.01
PDLIM1O00151 AL365496.1-201ENST00000426885 215 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 AC009414.1-201ENST00000427200 443 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 AC092427.1-202ENST00000430569 476 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 SNRPEP9-201ENST00000436794 238 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 CACYBPP2-201ENST00000453625 678 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.52□□□□□ -2.01
PDLIM1O00151 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.52□□□□□ -2.01
PDLIM1O00151 RPL23AP70-201ENST00000483361 460 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 RN7SL432P-201ENST00000484057 298 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.52□□□□□ -2.01
PDLIM1O00151 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.52□□□□□ -2.01
PDLIM1O00151 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.52□□□□□ -2.01
PDLIM1O00151 FABP5P5-201ENST00000515537 406 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 AP006587.4-201ENST00000526053 529 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 AP000889.2-201ENST00000532684 490 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.52□□□□□ -2.01
PDLIM1O00151 RPL21P5-201ENST00000554662 472 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 AL391261.3-201ENST00000557194 520 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 AC008088.1-201ENST00000580993 280 ntBASIC2.52□□□□□ -2.01
PDLIM1O00151 HMGN1P30-201ENST00000589286 268 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms