Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 BOLA3P3-201ENST00000505182 232 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AC117532.1-201ENST00000514638 323 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AP003066.2-201ENST00000529375 555 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 NACAP3-201ENST00000552100 481 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AP005229.2-201ENST00000609980 697 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AC092140.2-201ENST00000618027 521 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 AC091965.5-201ENST00000624785 342 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CHKB-CPT1BH3BT56 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 SNORD115-3-201ENST00000363100 82 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 RNU6-1222P-201ENST00000384615 107 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 RNU11-3P-201ENST00000391111 133 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 RNU6ATAC37P-201ENST00000408328 131 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AC097463.2-201ENST00000421074 142 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 SKA2P1-201ENST00000425592 390 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 CST2P1-201ENST00000425770 87 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AC007919.1-201ENST00000429380 217 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AC004924.1-201ENST00000480160 781 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 snoZ278.1-201ENST00000517059 112 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 BNIP3P27-201ENST00000599991 412 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AL713866.2-201ENST00000603579 219 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AL035411.2-201ENST00000604022 421 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 ELOCP5-201ENST00000604924 333 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AC004492.1-201ENST00000607036 742 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AC096577.2-201ENST00000611455 153 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AC106800.4-201ENST00000614905 153 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AC083865.1-201ENST00000636634 831 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 U2.21-201ENST00000637295 81 ntBASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CHKB-CPT1BH3BT56 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 MTCO1P23-201ENST00000415223 1526 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 RNU6-673P-201ENST00000365084 104 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 MIR100-201ENST00000385259 80 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AL121978.1-201ENST00000402778 359 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 RNU6-174P-201ENST00000410406 106 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 RPS3AP25-201ENST00000411660 793 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 USP9YP19-201ENST00000412165 485 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AC006461.1-201ENST00000412637 326 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 USP9YP13-201ENST00000417797 480 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AC013410.2-201ENST00000422627 201 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AL139415.2-201ENST00000431968 163 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AC245047.4-201ENST00000433189 144 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 Z85994.2-201ENST00000434327 452 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AL022238.1-201ENST00000442557 355 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AC079140.2-201ENST00000506193 142 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AC002400.1-201ENST00000569310 726 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 ROCK1P1-201ENST00000573767 549 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AF129408.1-201ENST00000608767 431 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 AL078604.3-201ENST00000615580 211 ntBASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.56□□□□□ -2.32
CHKB-CPT1BH3BT56 ZNF209P-201ENST00000593450 2304 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 AP005901.5-201ENST00000545779 1796 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 RNU6-778P-201ENST00000363269 103 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 RNU1-124P-201ENST00000363861 145 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 RNU6-60P-201ENST00000364792 103 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 MIR506-201ENST00000384998 124 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 SNORA48.1-201ENST00000390879 135 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 SNORA40.6-201ENST00000391153 128 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 UBE2Q2P12-201ENST00000414573 204 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 Z98742.3-201ENST00000418637 326 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 PPP1R11P2-201ENST00000423543 382 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 MTCYBP32-201ENST00000427945 1084 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 AC091390.1-201ENST00000433904 331 ntBASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.55□□□□□ -2.32
CHKB-CPT1BH3BT56 AL161651.1-201ENST00000440882 223 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms