Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC092125.1-201ENST00000562568 1995 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 SNORD114-1-201ENST00000362705 72 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 RNU6-637P-201ENST00000384050 107 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 SNORD115.1-201ENST00000391109 76 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 MTCYBP36-201ENST00000404146 440 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL021407.1-201ENST00000404531 386 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 RNU4-26P-201ENST00000410270 107 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 USP9YP13-201ENST00000417797 480 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC098826.1-201ENST00000433943 471 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL031667.1-201ENST00000440222 725 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 UBE2D3P4-201ENST00000441973 436 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC118469.1-201ENST00000442943 488 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC079804.2-201ENST00000490376 200 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 RPF2P2-201ENST00000504693 896 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC010486.3-201ENST00000511602 785 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 Y_RNA.688-201ENST00000516565 95 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AP003122.4-201ENST00000530980 758 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 ZNF519P3-201ENST00000557158 1032 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 MYL12BP1-201ENST00000569826 507 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC005951.2-201ENST00000576282 495 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 MIR4769-201ENST00000584126 77 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 Z99497.2-201ENST00000603634 310 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC106900.2-201ENST00000604994 317 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC105129.3-201ENST00000605455 485 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC067747.1-201ENST00000608026 250 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC110994.2-201ENST00000635481 492 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 MIR3974-201ENST00000637126 96 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC099654.13-201ENST00000639774 207 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 CKAP2P1-201ENST00000555477 2049 ntBASIC2.24□□□□□ -2.05
TMX2-CTNND1H3BSU7 SNORA1.3-201ENST00000384676 136 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 SNORA26.8-201ENST00000391306 124 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 FAT1P1-201ENST00000406588 507 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 CCDC58P2-201ENST00000417131 366 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC003685.2-201ENST00000422795 395 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 MTND2P4-201ENST00000445034 1004 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 BMI1P1-201ENST00000445879 941 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL359385.1-201ENST00000456509 365 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AP1S2P1-201ENST00000457344 379 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 RPL21P99-201ENST00000480369 423 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 RNU6-201P-201ENST00000517100 61 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC123904.2-201ENST00000548059 300 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL133153.1-201ENST00000557756 303 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 MIR4293-201ENST00000584305 78 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 GLUD1P4-201ENST00000590914 418 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC004067.1-201ENST00000608733 700 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC138749.5-201ENST00000611461 208 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC093838.1-201ENST00000613014 469 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC027807.2-201ENST00000616099 408 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC116165.2-201ENST00000616705 206 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC078883.4-201ENST00000623218 367 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC112204.3-201ENST00000623822 332 ntBASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.23□□□□□ -2.05
TMX2-CTNND1H3BSU7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms